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More September, 2007 bioinformatics journal articles.- Comprehensive identification of proteins in Hodgkin lymphoma-derived Reed-Sternberg cells by LC-MS/MS.
by Wallentine JC, Kim KK, Iii CE, Vaughn CP, Crockett DK, Tripp SR, Elenitoba-Johnson KS, Lim MS.
Journal: Lab Invest. :
- Conserved lysin and arginin residues in the extracellular loop of P2X(3) receptors are involved in agonist binding.
by Fischer W, Zadori Z, Kullnick Y, Gröger-Arndt H, Franke H, Wirkner K, Illes P, Mager PP.
Journal: Eur J Pharmacol. :
- CHRNA4 and Tobacco Dependence: From Gene Regulation to Treatment Outcome.
by Hutchison KE, Allen DL, Filbey FM, Jepson C, Lerman C, Benowitz NL, Stitzel J, Bryan A, McGeary J, Haughey HM.
Journal: Arch Gen Psychiatry. 64(9):1078-86
- Efficient parameter estimation for spatio-temporal models of pattern formation: Case study of Drosophila melanogaster.
by Nanfack YF, Kaandorp JA, Blom J.
Journal: Bioinformatics. :
- Genome wide expression analysis in HPV16 Cervical Cancer: Identification of altered metabolic pathways.
by Perez-Plasencia C, Vazquez-Ortiz G, Lopez-Romero R, Pina-Sanchez P, Moreno J, Salcedo M.
Journal: Infect Agent Cancer. 2(1):16
- Linear discrimination of transmembrane from non-transmembrane segments in proteins using higher-order crossings.
by Hadjileontiadis LJ, Kitsas IK, Panas SM.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1(1):5818-5821
- DetectiV: visualisation, normalisation and significance testing for pathogen-detection microarray data.
by Watson M, Dukes J, Abu-Median AB, King DP, Britton P.
Journal: Genome Biol. 8(9):R190
- Interpreting microarray data: towards the complete bioinformatics toolkit for cancer.
by Roberts ML, Kottaridis SD.
Journal: Cancer Genomics Proteomics. 2007 Jul-Aug;4(4):301-8
- A draft gene regulatory network for cellular totipotency reprogramming during plant somatic embryogenesis.
by Zeng F, Zhang X, Cheng L, Hu L, Zhu L, Cao J, Guo X.
Journal: Genomics. :
- The Global Trace Graph, a Novel Paradigm for Searching Protein Sequence Databases.
by Heger A, Mallick S, Wilton C, Holm L.
Journal: Bioinformatics. :
- [The molecular characteristics of T-cell immune reconstitution in leukemia patients after allogeneic hematopoietic stem cell transplantation]
by Fu YW, Wu DP, Sun AN, Feng YF, Chang WR, Zhu ZL, Zhu P.
Journal: Zhonghua Xue Ye Xue Za Zhi. 28(5):312-7
- A Bioinformatics Approach to Identifying Tail-anchored Proteins in the Human Genome.
by Kalbfleisch T, Cambon A, Wattenberg BW.
Journal: Traffic. :
- A Simple Intact Protein Analysis by MALDI-MS for Characterization of Ribosomal Proteins of Two Genome-Sequenced Lactic Acid Bacteria and Verification of Their Amino Acid Sequences.
by Teramoto K, Sato H, Sun L, Torimura M, Tao H.
Journal: J Proteome Res. :
- A primer on learning in Bayesian networks for computational biology.
by Needham CJ, Bradford JR, Bulpitt AJ, Westhead DR.
Journal: PLoS Comput Biol. 3(8):e129
- A Genetic Method to Analyze Essential Genes of Escherichia coli.
by Hupert-Kocurek K, Sage JM, Makowska-Grzyska M, Kaguni JM.
Journal: Appl Environ Microbiol. :
- Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre.
by Bennett-Lovsey RM, Herbert AD, Sternberg MJ, Kelley LA.
Journal: Proteins. :
- Prediction of RNA-Binding Residues in Protein Sequences Using Support Vector Machines.
by Brown SJ, Wang L.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1(1):5830-5833
- TMPRSS2:ERG gene fusion associated with lethal prostate cancer in a watchful waiting cohort Demichelis F, Fall K, Perner S, Andrén O, Schmidt F, Setlur SR, Hoshida Y, Mosquera JM, Pawitan Y, Lee C, Adami HO, Mucci LA, Kantoff PW, Andersson SO, Chinnaiyan AM, Johansson JE, Rubin MA, Department of Pathology, Brigham and Women's Hospital, Boston, MA; Harvard Medical School, Boston, MA; and Bioinformatics Group, SRA, ITC-irst, Trento, Italy.
by Kibel AS.
Journal: Urol Oncol. 2007 Sep-Oct;25(5):448-9
- A novel knowledge-based approach to design inorganic binding peptides.
by Oren EE, Tamerler C, Sahin D, Hnilova M, Seke UO, Sarikaya M, Samudrala R.
Journal: Bioinformatics. :
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