More January, 2007 bioinformatics journal articles.- Direct identification of proteins from T47D cells and murine brain tissue by matrix-assisted laser desorption/ionization post-source decay/collision-induced dissociation.
by Pevsner PH, Naftolin F, Hillman DE, Miller DC, Fadiel A, Kogus A, Stern A, Samuels HH.
Journal: Rapid Commun Mass Spectrom. 21(3):429-436
- The protease allergen Der p 1 cleaves cell surface DC-SIGN and DC-SIGNR: experimental analysis of in silico substrate identification and implications in allergic responses.
by Furmonaviciene R, Ghaemmaghami AM, Boyd SE, Jones NS, Bailey K, Willis AC, Sewell HF, Mitchell DA, Shakib F.
Journal: Clin Exp Allergy. 37(2):231-42
- [Human Esophageal Carcinoma Antigens Screened by Serologic Analysis of Recombinant cDNA Expression Libraries (SEREX).]
by Yu L, Hu H, Ran YL, Peng LP, Li JW, Yang ZH.
Journal: Ai Zheng. 26(1):100-5
- Bioinformatics and experimental derivation of an efficient hybrid 3' untranslated region and use in expression active linear DNA with minimum poly(A) region.
by Al-Zoghaibi F, Ashour T, Al-Ahmadi W, Abulleef H, Demirkaya O, Khabar KS.
Journal: Gene. :
- MinSet : A general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database.
by Pandini A, Bonati L, Fraternali F, Kleinjung J.
Journal: Bioinformatics. :
- DiscoverySpace: an interactive data analysis application.
by Robertson N, Oveisi-Fordorei M, Zuyderduyn S, Varhol R, Fjell C, Marra MA, Jones SJ, Siddiqui AS.
Journal: Genome Biol. 8(1):R6
- Rediscovering secondary structures as network motifs--an unsupervised learning approach.
by Raveh B, Rahat O, Basri R, Schreiber G.
Journal: Bioinformatics. 23(2):e163-9
- Reciprocal Modifications of CLIC4 in Tumor Epithelium and Stroma Mark Malignant Progression of Multiple Human Cancers.
by Suh KS, Crutchley JM, Koochek A, Ryscavage A, Bhat K, Tanaka T, Oshima A, Fitzgerald P, Yuspa SH.
Journal: Clin Cancer Res. 13(1):121-31
- Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools.
by Greenbaum JA, Andersen PH, Blythe M, Bui HH, Cachau RE, Crowe J, Davies M, Kolaskar AS, Lund O, Morrison S, Mumey B, Ofran Y, Pellequer JL, Pinilla C, Ponomarenko JV, Raghava GP, van Regenmortel MH, Roggen EL, Sette A, Schlessinger A, Sollner J, Zand M, Peters B.
Journal: J Mol Recognit. :
- A comparative genome approach to marker ordering.
by Faraut T, de Givry S, Chabrier P, Derrien T, Galibert F, Hitte C, Schiex T.
Journal: Bioinformatics. 23(2):e50-6
- Splice site identification using probabilistic parameters and SVM classification.
by Baten A, Chang B, Halgamuge S, Li J.
Journal: BMC Bioinformatics. 7 Suppl 5:S15
- Curation of viral genomes: challenges, applications and the way forward.
by Kulkarni-Kale U, Bhosle SG, Manjari GS, Joshi M, Bansode S, Kolaskar AS.
Journal: BMC Bioinformatics. 7 Suppl 5:S12
- Molecular tools for metalloprotease sub-proteome generation.
by Collet M, Lenger J, Jenssen K, Plattner HP, Sewald N.
Journal: J Biotechnol. :
- Nested Containment List (NCList): A new algorithm for accelerating interval query of genome alignment and interval databases.
by Alekseyenko AV, Lee CJ.
Journal: Bioinformatics. :
- Maximum common subgraph: some upper bound and lower bound results.
by Huang X, Lai J, Jennings SF.
Journal: BMC Bioinformatics. 7 Suppl 4:S6
- The modular nature of genetic diseases.
by Oti M, Brunner H.
Journal: Clin Genet. 71(1):1-11
- Epidemiological comparisons of codon usage patterns among HIV-1 isolates from Asia, Europe, Africa and the Americas.
by Ahn I, Son HS.
Journal: Exp Mol Med. 38(6):643-51
- Biskit-A software platform for structural bioinformatics.
by Grünberg R, Nilges M, Leckner J.
Journal: Bioinformatics. :
- A glycoproteome database of normal human liver tissue.
by Zhou HJ, Liu YK, Chui JF, Sun QL, Lu WJ, Guo K, Jin H, Wei LM, Yang PY.
Journal: J Cancer Res Clin Oncol. :
- Bioinformatics and microbial biodiversity: analysis of vibrios by the GenEnv system.
by Paparini A, Santoni D, Romano Spica V.
Journal: J Prev Med Hyg. 47(3):100-4
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