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| Journal Articles Details
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| Bioinformatics Journals and Computational Biology Journals |
| Bioorg Med Chem. 13(10):3397-404 |
Linear indices of the 'macromolecular graph's nucleotides adjacency matrix' as a promising approach for bioinformatics studies. Part 1: Prediction of paromomycin's affinity constant with HIV-1 Psi-RNA packaging region. |
Marrero Ponce Y, Castillo Garit JA, Nodarse D.
Department of Pharmacy, Faculty of Chemical-Pharmacy and Department of Drug Design, Chemical Bioactive Center, Central University of Las Villas, Santa Clara 54830, Villa Clara, Cuba. |
Publication Date: Monday, April 25, 2005
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Click here to view MEDLINE citation |
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More April, 2005 bioinformatics journal articles.- The molecular make-up of a tumour: proteomics in cancer research.
by Kolch W, Mischak H, Pitt AR. Journal: Clin Sci (Lond). 108(5):369-83
- Determinants of the inherent strength of human 5' splice sites.
by Roca X, Sachidanandam R, Krainer AR. Journal: RNA. 11(5):683-98
- Comparative metagenomics of microbial communities.
by Tringe SG, von Mering C, Kobayashi A, Salamov AA, Chen K, Chang HW, Podar M, Short JM, Mathur EJ, Detter JC, Bork P, Hugenholtz P, Rubin EM. Journal: Science. 308(5721):554-7
- Thermodynamic and kinetic basis for the relaxed DNA sequence specificity of "promiscuous" mutant EcoRI endonucleases.
by Sapienza PJ, Dela Torre CA, McCoy WH, Jana SV, Jen-Jacobson L. Journal: J Mol Biol. 348(2):307-24
- Two forms of the large tumor suppressor gene (Lats1) protein expressed in the vertebrate retina.
by Akhmedov NB, Yamashita CK, Tran D, Piri NI, Aguirre GD, Farber DB. Journal: Biochim Biophys Acta. 1728(1-2):11-7
- Wnt pathway curation using automated natural language processing: combining statistical methods with partial and full parse for knowledge extraction.
by Santos C, Eggle D, States DJ. Journal: Bioinformatics. 21(8):1653-8
- Immunology and mathematics: crossing the divide.
by Callard RE, Yates AJ. Journal: Immunology. 115(1):21-33
- Support vector machines for prediction and analysis of Beta and gamma-turns in proteins.
by Pham TH, Satou K, Ho TB. Journal: J Bioinform Comput Biol. 3(2):343-58
- TM-align: a protein structure alignment algorithm based on the TM-score.
by Zhang Y, Skolnick J. Journal: Nucleic Acids Res. 33(7):2302-9
- Shortest triplet clustering: reconstructing large phylogenies using representative sets.
by Vinh LS, von Haeseler A. Journal: BMC Bioinformatics. 6(1):92
- Expression profiling suggests a regulatory role of gallbladder in lipid homeostasis.
by Yuan ZB, Han TQ, Jiang ZY, Fei J, Zhang Y, Qin J, Tian ZJ, Shang J, Jiang ZH, Cai XX, Jiang Y, Zhang SD. Journal: World J Gastroenterol. 11(14):2109-16
- Identification of the Alternative Promoters of the KChIP4 Subfamily.
by Deng XY, Cai F, Xia K, Pan Q, Long ZG, Wu LQ, Liang DS, Dai HP, Zhang ZH, Xia JH. Journal: Acta Biochim Biophys Sin (Shanghai). 37(4):241-7
- A theoretical model of restriction endonuclease NlaIV in complex with DNA, predicted by fold recognition and validated by site-directed mutagenesis and circular dichroism spectroscopy.
by Chmiel AA, Radlinska M, Pawlak SD, Krowarsch D, Bujnicki JM, Skowronek KJ. Journal: Protein Eng Des Sel. :
- Experimental and bioinformatic approaches for interrogating protein-protein interactions to determine protein function.
by Droit A, Poirier GG, Hunter JM. Journal: J Mol Endocrinol. 34(2):263-80
- Transcripts from a human primordial follicle cDNA library.
by Serafica MD, Goto T, Trounson AO. Journal: Hum Reprod. :
- A genome-wide analysis of C/D and H/ACA-like small nucleolar RNAs in Trypanosoma brucei reveals a trypanosome-specific pattern of rRNA modification.
by Liang XH, Uliel S, Hury A, Barth S, Doniger T, Unger R, Michaeli S. Journal: RNA. 11(5):619-45
- Comparative genomics on Wnt11 gene.
by Katoh Y, Katoh M. Journal: Int J Mol Med. 15(5):879-83
- Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator.
by Garcia A, Thoraval S, Garcia LJ, Ragan MA. Journal: BMC Bioinformatics. 6(1):87
- Bioinformatics.
by Journal: Nat Biotechnol. 23(4):493
- Clustering algorithms for identifying core atom sets and for assessing the precision of protein structure ensembles.
by Snyder DA, Montelione GT. Journal: Proteins. :
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