More December, 2003 bioinformatics journal articles.- The Arabidopsis KAKTUS gene encodes a HECT protein and controls the number of endoreduplication cycles.
by El Refy A, Perazza D, Zekraoui L, Valay JG, Bechtold N, Brown S, Hülskamp M, Herzog M, Bonneville JM.
Journal: Mol Genet Genomics. 10 2003;270(5):403-14
- CryptoDB: the Cryptosporidium genome resource.
by Puiu D, Enomoto S, Buck GA, Abrahamsen MS, Kissinger JC.
Journal: Nucleic Acids Res. 32 Database issue:D329-31
- Toward national comparable nurse practitioner data: proposed data elements, rationale, and methods.
by Jenkins ML.
Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):342-50
- Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.
by Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H.
Journal: Genome Res. 13(12):2736-46
- Database resources of the National Center for Biotechnology Information: update.
by Wheeler DL, Church DM, Edgar R, Federhen S, Helmberg W, Madden TL, Pontius JU, Schuler GD, Schriml LM, Sequeira E, Suzek TO, Tatusova TA, Wagner L.
Journal: Nucleic Acids Res. 32 Database issue:D35-40
- In silico study of breast cancer associated gene 3 using LION Target Engine and other tools.
by León DA, C naves JM.
Journal: Biotechniques. 35(6):1222-6, 1228, 1230-1
- Does recombination shape the distribution and evolution of tandemly arrayed genes (TAGs) in the Arabidopsis thaliana genome?
by Zhang L, Gaut BS.
Journal: Genome Res. 13(12):2533-40
- WormBase: a multi-species resource for nematode biology and genomics.
by Harris TW, Chen N, Cunningham F, Tello-Ruiz M, Antoshechkin I, Bastiani C, Bieri T, Blasiar D, Bradnam K, Chan J, Chen CK, Chen WJ, Davis P, Kenny E, Kishore R, Lawson D, Lee R, Muller HM, Nakamura C, Ozersky P, Petcherski A, Rogers A, Sabo A, Schwarz EM, Van Auken K, Wang Q, Durbin R, Spieth J, Sternberg PW, Stein LD.
Journal: Nucleic Acids Res. 32 Database issue:D411-7
- ArchDB: automated protein loop classification as a tool for structural genomics.
by Espadaler J, Fernandez-Fuentes N, Hermoso A, Querol E, Aviles FX, Sternberg MJ, Oliva B.
Journal: Nucleic Acids Res. 32 Database issue:D185-8
- Gene length and proximity to neighbors affect genome-wide expression levels.
by Chiaromonte F, Miller W, Bouhassira EE.
Journal: Genome Res. 11 2003;13(12):2602-8
- EMDep: a web-based system for the deposition and validation of high-resolution electron microscopy macromolecular structural information.
by Henrick K, Newman R, Tagari M, Chagoyen M.
Journal: J Struct Biol. 2003 Oct-Nov;144(1-2):228-37
- Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.
by Christie KR, Weng S, Balakrishnan R, Costanzo MC, Dolinski K, Dwight SS, Engel SR, Feierbach B, Fisk DG, Hirschman JE, Hong EL, Issel-Tarver L, Nash R, Sethuraman A, Starr B, Theesfeld CL, Andrada R, Binkley G, Dong Q, Lane C, Schroeder M, Botstein D, Cherry JM.
Journal: Nucleic Acids Res. 32 Database issue:D311-4
- Development of a porcine brain cDNA library, EST database, and microarray resource.
by Nobis W, Ren X, Suchyta SP, Suchyta TR, Zanella AJ, Coussens PM.
Journal: Physiol Genomics. 12 2003;16(1):153-9
- HUGE: a database for human KIAA proteins, a 2004 update integrating HUGEppi and ROUGE.
by Kikuno R, Nagase T, Nakayama M, Koga H, Okazaki N, Nakajima D, Ohara O.
Journal: Nucleic Acids Res. 32 Database issue:D502-4
- A complete set of SNAREs in yeast.
by Burri L, Lithgow T.
Journal: Traffic. 5(1):45-52
- TransportDB: a relational database of cellular membrane transport systems.
by Ren Q, Kang KH, Paulsen IT.
Journal: Nucleic Acids Res. 32 Database issue:D284-8
- A novel database of disulfide patterns and its application to the discovery of distantly related homologs.
by van Vlijmen HW, Gupta A, Narasimhan LS, Singh J.
Journal: J Mol Biol. 335(4):1083-92
- The Rice PIPELINE: a unification tool for plant functional genomics.
by Yazaki J, Kojima K, Suzuki K, Kishimoto N, Kikuchi S.
Journal: Nucleic Acids Res. 32 Database issue:D383-7
- Anti-osteoactivin antibody inhibits osteoblast differentiation and function in vitro.
by Selim AA, Abdelmagid SM, Kanaan RA, Smock SL, Owen TA, Popoff SN, Safadi FF.
Journal: Crit Rev Eukaryot Gene Expr. 13(2-4):265-75
- A protein interaction map of Drosophila melanogaster.
by Giot L, Bader JS, Brouwer C, Chaudhuri A, Kuang B, Li Y, Hao YL, Ooi CE, Godwin B, Vitols E, Vijayadamodar G, Pochart P, Machineni H, Welsh M, Kong Y, Zerhusen B, Malcolm R, Varrone Z, Collis A, Minto M, Burgess S, McDaniel L, Stimpson E, Spriggs F, Williams J, Neurath K, Ioime N, Agee M, Voss E, Furtak K, Renzulli R, Aanensen N, Carrolla S, Bickelhaupt E, Lazovatsky Y, DaSilva A, Zhong J, Stanyon CA, Finley RL, White KP, Braverman M, Jarvie T, Gold S, Leach M, Knight J, Shimkets RA, McKenna MP
Journal: Science. 11 2003;302(5651):1727-36
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