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More December, 2003 bioinformatics journal articles.- The Pfam protein families database.
by Bateman A, Coin L, Durbin R, Finn RD, Hollich V, Griffiths-Jones S, Khanna A, Marshall M, Moxon S, Sonnhammer EL, Studholme DJ, Yeats C, Eddy SR.
Journal: Nucleic Acids Res. 32 Database issue:D138-41
- Reliable classification of two-class cancer data using evolutionary algorithms.
by Deb K, Raji Reddy A.
Journal: Biosystems. 72(1-2):111-29
- HERVd: the Human Endogenous RetroViruses Database: update.
by Paces J, Pavlícek A, Zika R, Kapitonov VV, Jurka J, Paces V.
Journal: Nucleic Acids Res. 32 Database issue:D50
- A Shannon entropy-based filter detects high- quality profile-profile alignments in searches for remote homologues.
by Capriotti E, Fariselli P, Rossi I, Casadio R.
Journal: Proteins. 54(2):351-60
- SNP500Cancer: a public resource for sequence validation and assay development for genetic variation in candidate genes.
by Packer BR, Yeager M, Staats B, Welch R, Crenshaw A, Kiley M, Eckert A, Beerman M, Miller E, Bergen A, Rothman N, Strausberg R, Chanock SJ.
Journal: Nucleic Acids Res. 32 Database issue:D528-32
- ACLAME: a CLAssification of Mobile genetic Elements.
by Leplae R, Hebrant A, Wodak SJ, Toussaint A.
Journal: Nucleic Acids Res. 32 Database issue:D45-9
- Petri Net representations in systems biology.
by Pinney JW, Westhead DR, McConkey GA.
Journal: Biochem Soc Trans. 31(Pt 6):1513-5
- Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences.
by Krebs WG, Tsai J, Alexandrov V, Junker J, Jansen R, Gerstein M.
Journal: Methods Enzymol. 374:544-84
- Computational design and characterization of a monomeric helical dinuclear metalloprotein.
by Calhoun JR, Kono H, Lahr S, Wang W, DeGrado WF, Saven JG.
Journal: J Mol Biol. 334(5):1101-15
- Representing nursing assessments in clinical information systems using the logical observation identifiers, names, and codes database.
by Matney S, Bakken S, Huff SM.
Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):287-93
- A BAC-based physical map of the chicken genome.
by Ren C, Lee MK, Yan B, Ding K, Cox B, Romanov MN, Price JA, Dodgson JB, Zhang HB.
Journal: Genome Res. 13(12):2754-8
- PFIT and PFRIT: bioinformatic algorithms for detecting glycosidase function from structure and sequence.
by Kleiger G, Panina EM, Mallick P, Eisenberg D.
Journal: Protein Sci. 13(1):221-9
- The SUPERFAMILY database in 2004: additions and improvements.
by Madera M, Vogel C, Kummerfeld SK, Chothia C, Gough J.
Journal: Nucleic Acids Res. 32 Database issue:D235-9
- In silico study of breast cancer associated gene 3 using LION Target Engine and other tools.
by León DA, C naves JM.
Journal: Biotechniques. 35(6):1222-6, 1228, 1230-1
- Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique.
by Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Pühler A, Meyer F.
Journal: J Biotechnol. 106(2-3):121-33
- Analysis and functional annotation of an expressed sequence tag collection for tropical crop sugarcane.
by Vettore AL, da Silva FR, Kemper EL, Souza GM, da Silva AM, Ferro MI, Henrique-Silva F, Giglioti EA, Lemos MV, Coutinho LL, Nobrega MP, Carrer H, França SC, Bacci Júnior M, Goldman MH, Gomes SL, Nunes LR, Camargo LE, Siqueira WJ, Van Sluys MA, Thiemann OH, Kuramae EE, Santelli RV, Marino CL, Targon ML, Ferro JA, Silveira HC, Marini DC, Lemos EG, Monteiro-Vitorello CB, Tambor JH, Carraro DM, Roberto PG, Martins VG, Goldman GH, de Oliveira RC, Truffi D, Colombo CA, Rossi M, de Araujo PG, Sculaccio
Journal: Genome Res. 11 2003;13(12):2725-35
- FLAGdb++: a database for the functional analysis of the Arabidopsis genome.
by Samson F, Brunaud V, Duchêne S, De Oliveira Y, Caboche M, Lecharny A, Aubourg S.
Journal: Nucleic Acids Res. 32 Database issue:D347-50
- Is the brain cortex a fractal?
by Kiselev VG, Hahn KR, Auer DP.
Journal: Neuroimage. 20(3):1765-74
- The ion transporter superfamily.
by Prakash S, Cooper G, Singhi S, Saier MH.
Journal: Biochim Biophys Acta. 1618(1):79-92
- Whole-genome analysis of two-component signal transduction genes in fungal pathogens.
by Catlett NL, Yoder OC, Turgeon BG.
Journal: Eukaryot Cell. 2(6):1151-61
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