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More December, 2003 bioinformatics journal articles.- trome, trEST and trGEN: databases of predicted protein sequences.
by Sperisen P, Iseli C, Pagni M, Stevenson BJ, Bucher P, Jongeneel CV.
Journal: Nucleic Acids Res. 32 Database issue:D509-11
- Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteins.
by Kuhn M, Meiler J, Baker D.
Journal: Proteins. 54(2):282-8
- Analysis of gene expression profiles: an application of memetic algorithms to the minimum sum-of-squares clustering problem.
by Merz P.
Journal: Biosystems. 72(1-2):99-109
- Development of a porcine brain cDNA library, EST database, and microarray resource.
by Nobis W, Ren X, Suchyta SP, Suchyta TR, Zanella AJ, Coussens PM.
Journal: Physiol Genomics. 12 2003;16(1):153-9
- Automatic solution of heavy-atom substructures.
by Weeks CM, Adams PD, Berendzen J, Brunger AT, Dodson EJ, Grosse-Kunstleve RW, Schneider TR, Sheldrick GM, Terwilliger TC, Turkenburg MG, Usón I.
Journal: Methods Enzymol. 374:37-83
- The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface.
by Chen J, Zhao P, Massaro D, Clerch LB, Almon RR, DuBois DC, Jusko WJ, Hoffman EP.
Journal: Nucleic Acids Res. 32 Database issue:D578-81
- THGS: a web-based database of Transmembrane Helices in Genome Sequences.
by Fernando SA, Selvarani P, Das S, Kumar ChK, Mondal S, Ramakumar S, Sekar K.
Journal: Nucleic Acids Res. 32 Database issue:D125-8
- Statistical issues and methods for meta-analysis of microarray data: a case study in prostate cancer.
by Ghosh D, Barette TR, Rhodes D, Chinnaiyan AM.
Journal: Funct Integr Genomics. 07 2003;3(4):180-8
- IntAct: an open source molecular interaction database.
by Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, Vingron M, Roechert B, Roepstorff P, Valencia A, Margalit H, Armstrong J, Bairoch A, Cesareni G, Sherman D, Apweiler R.
Journal: Nucleic Acids Res. 32 Database issue:D452-5
- caCORE: a common infrastructure for cancer informatics.
by Covitz PA, Hartel F, Schaefer C, De Coronado S, Fragoso G, Sahni H, Gustafson S, Buetow KH.
Journal: Bioinformatics. 19(18):2404-12
- Update of NUREBASE: nuclear hormone receptor functional genomics.
by Ruau D, Duarte J, Ourjdal T, Perrière G, Laudet V, Robinson-Rechavi M.
Journal: Nucleic Acids Res. 32 Database issue:D165-7
- ACLAME: a CLAssification of Mobile genetic Elements.
by Leplae R, Hebrant A, Wodak SJ, Toussaint A.
Journal: Nucleic Acids Res. 32 Database issue:D45-9
- Dimerization in aminergic G-protein-coupled receptors: application of a hidden-site class model of evolution.
by Soyer OS, Dimmic MW, Neubig RR, Goldstein RA.
Journal: Biochemistry. 42(49):14522-31
- Proteomics and hypertension.
by Thongboonkerd V, Klein JB.
Journal: Contrib Nephrol. 141:245-56
- Integrating functional genomics data.
by Kemmeren P, Holstege FC.
Journal: Biochem Soc Trans. 31(Pt 6):1484-7
- RTCGD: retroviral tagged cancer gene database.
by Akagi K, Suzuki T, Stephens RM, Jenkins NA, Copeland NG.
Journal: Nucleic Acids Res. 32 Database issue:D523-7
- Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences.
by Jensen MA, Li FS, van 't Wout AB, Nickle DC, Shriner D, He HX, McLaughlin S, Shankarappa R, Margolick JB, Mullins JI.
Journal: J Virol. 77(24):13376-88
- Full-malaria 2004: an enlarged database for comparative studies of full-length cDNAs of malaria parasites, Plasmodium species.
by Watanabe J, Suzuki Y, Sasaki M, Sugano S.
Journal: Nucleic Acids Res. 32 Database issue:D334-8
- BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics.
by Zhao W, Wang J, He X, Huang X, Jiao Y, Dai M, Wei S, Fu J, Chen Y, Ren X, Zhang Y, Ni P, Zhang J, Li S, Wang J, Wong GK, Zhao H, Yu J, Yang H, Wang J.
Journal: Nucleic Acids Res. 32 Database issue:D377-82
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