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More December, 2003 bioinformatics journal articles.- SGMD: the Soybean Genomics and Microarray Database.
by Alkharouf NW, Matthews BF. Journal: Nucleic Acids Res. 32 Database issue:D398-400
- Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.
by Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H. Journal: Genome Res. 13(12):2736-46
- Structural bioinformatics study of EPSP synthase from Mycobacterium tuberculosis.
by Pereira JH, Canduri F, de Oliveira JS, da Silveira NJ, Basso LA, Palma MS, de Azevedo WF, Santos DS. Journal: Biochem Biophys Res Commun. 312(3):608-14
- CADRE: the Central Aspergillus Data REpository.
by Mabey JE, Anderson MJ, Giles PF, Miller CJ, Attwood TK, Paton NW, Bornberg-Bauer E, Robson GD, Oliver SG, Denning DW. Journal: Nucleic Acids Res. 32 Database issue:D401-5
- Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases.
by Robertson GA, Thiruvenkataswamy V, Shilling H, Price EP, Huygens F, Henskens FA, Giffard PM. Journal: J Med Microbiol. 53(Pt 1):35-45
- Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era.
by Kell DB, Oliver SG. Journal: Bioessays. 26(1):99-105
- A new addition to the structural bioinformatics toolbox: 3D models of short bioactive peptides from multiple sequences using feedback restrained molecular dynamics (FRMD).
by Cachau RE, González-Sapienza G, Burt SK, Ventura ON. Journal: Cell Mol Biol (Noisy-le-grand). 49(6):973-83
- GELBANK: a database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes.
by Babnigg G, Giometti CS. Journal: Nucleic Acids Res. 32 Database issue:D582-5
- ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins.
by Hotelier T, Renault L, Cousin X, Negre V, Marchot P, Chatonnet A. Journal: Nucleic Acids Res. 32 Database issue:D145-7
- DNA and the revolutions of molecular evolution, computational biology, and bioinformatics.
by Golding GB. Journal: Genome. 46(6):930-5
- EMDep: a web-based system for the deposition and validation of high-resolution electron microscopy macromolecular structural information.
by Henrick K, Newman R, Tagari M, Chagoyen M. Journal: J Struct Biol. 2003 Oct-Nov;144(1-2):228-37
- trome, trEST and trGEN: databases of predicted protein sequences.
by Sperisen P, Iseli C, Pagni M, Stevenson BJ, Bucher P, Jongeneel CV. Journal: Nucleic Acids Res. 32 Database issue:D509-11
- ASD: the Alternative Splicing Database.
by Thanaraj TA, Stamm S, Clark F, Riethoven JJ, Le Texier V, Muilu J. Journal: Nucleic Acids Res. 32 Database issue:D64-9
- MitoP2, an integrated database on mitochondrial proteins in yeast and man.
by Andreoli C, Prokisch H, Hörtnagel K, Mueller JC, Münsterkötter M, Scharfe C, Meitinger T. Journal: Nucleic Acids Res. 32 Database issue:D459-62
- ApiEST-DB: analyzing clustered EST data of the apicomplexan parasites.
by Li L, Crabtree J, Fischer S, Pinney D, Stoeckert CJ, Sibley LD, Roos DS. Journal: Nucleic Acids Res. 32 Database issue:D326-8
- The distribution and query systems of the RCSB Protein Data Bank.
by Bourne PE, Addess KJ, Bluhm WF, Chen L, Deshpande N, Feng Z, Fleri W, Green R, Merino-Ott JC, Townsend-Merino W, Weissig H, Westbrook J, Berman HM. Journal: Nucleic Acids Res. 32 Database issue:D223-5
- Finding unexpected patterns in microarray data.
by Perelman S, Mazzella MA, Muschietti J, Zhu T, Casal JJ. Journal: Plant Physiol. 133(4):1717-25
- A new pairwise folding potential based on improved decoy generation and side-chain packing.
by Loose C, Klepeis JL, Floudas CA. Journal: Proteins. 54(2):303-14
- A BAC-based physical map of the chicken genome.
by Ren C, Lee MK, Yan B, Ding K, Cox B, Romanov MN, Price JA, Dodgson JB, Zhang HB. Journal: Genome Res. 13(12):2754-8
- Building nursing knowledge through informatics: from concept representation to data mining.
by Bakken S, Hardiker NR. Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):229-31
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