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More December, 2003 bioinformatics journal articles.- Efficiency improvement of peptide identification for an organism without complete genome sequence, using expressed sequence tag database and tandem mass spectral data.
by Kwon KH, Kim M, Kim JY, Kim KW, Kim SI, Park YM, Yoo JS.
Journal: Proteomics. 3(12):2305-9
- Petri Net representations in systems biology.
by Pinney JW, Westhead DR, McConkey GA.
Journal: Biochem Soc Trans. 31(Pt 6):1513-5
- GeneDB: a resource for prokaryotic and eukaryotic organisms.
by Hertz-Fowler C, Peacock CS, Wood V, Aslett M, Kerhornou A, Mooney P, Tivey A, Berriman M, Hall N, Rutherford K, Parkhill J, Ivens AC, Rajandream MA, Barrell B.
Journal: Nucleic Acids Res. 32 Database issue:D339-43
- Bioinformatic analysis of the nucleolus.
by Leung AK, Andersen JS, Mann M, Lamond AI.
Journal: Biochem J. 376(Pt 3):553-69
- The Mouse SAGE Site: database of public mouse SAGE libraries.
by Divina P, Forejt J.
Journal: Nucleic Acids Res. 32 Database issue:D482-3
- An assessment of the resistance gene analogues of Oryza sativa ssp. japonica: their presence and structure.
by Koczyk G, Chelkowski J.
Journal: Cell Mol Biol Lett. 8(4):963-72
- The distribution and query systems of the RCSB Protein Data Bank.
by Bourne PE, Addess KJ, Bluhm WF, Chen L, Deshpande N, Feng Z, Fleri W, Green R, Merino-Ott JC, Townsend-Merino W, Weissig H, Westbrook J, Berman HM.
Journal: Nucleic Acids Res. 32 Database issue:D223-5
- MODBASE, a database of annotated comparative protein structure models, and associated resources.
by Pieper U, Eswar N, Braberg H, Madhusudhan MS, Davis FP, Stuart AC, Mirkovic N, Rossi A, Marti-Renom MA, Fiser A, Webb B, Greenblatt D, Huang CC, Ferrin TE, Sali A.
Journal: Nucleic Acids Res. 32 Database issue:D217-22
- Update of NUREBASE: nuclear hormone receptor functional genomics.
by Ruau D, Duarte J, Ourjdal T, Perrière G, Laudet V, Robinson-Rechavi M.
Journal: Nucleic Acids Res. 32 Database issue:D165-7
- The European ribosomal RNA database.
by Wuyts J, Perrière G, Van De Peer Y.
Journal: Nucleic Acids Res. 32 Database issue:D101-3
- The next step in systems biology: simulating the temporospatial dynamics of molecular network.
by Zhu H, Huang S, Dhar P.
Journal: Bioessays. 26(1):68-72
- Analysis and functional annotation of an expressed sequence tag collection for tropical crop sugarcane.
by Vettore AL, da Silva FR, Kemper EL, Souza GM, da Silva AM, Ferro MI, Henrique-Silva F, Giglioti EA, Lemos MV, Coutinho LL, Nobrega MP, Carrer H, França SC, Bacci Júnior M, Goldman MH, Gomes SL, Nunes LR, Camargo LE, Siqueira WJ, Van Sluys MA, Thiemann OH, Kuramae EE, Santelli RV, Marino CL, Targon ML, Ferro JA, Silveira HC, Marini DC, Lemos EG, Monteiro-Vitorello CB, Tambor JH, Carraro DM, Roberto PG, Martins VG, Goldman GH, de Oliveira RC, Truffi D, Colombo CA, Rossi M, de Araujo PG, Sculaccio
Journal: Genome Res. 11 2003;13(12):2725-35
- Protein interaction: same network, different hubs.
by Hoffmann R, Valencia A.
Journal: Trends Genet. 19(12):681-3
- Mosaic evolution of the severe acute respiratory syndrome coronavirus.
by Stavrinides J, Guttman DS.
Journal: J Virol. 78(1):76-82
- Molecular classification of cancer types from microarray data using the combination of genetic algorithms and support vector machines.
by Peng S, Xu Q, Ling XB, Peng X, Du W, Chen L.
Journal: FEBS Lett. 555(2):358-62
- A new addition to the structural bioinformatics toolbox: 3D models of short bioactive peptides from multiple sequences using feedback restrained molecular dynamics (FRMD).
by Cachau RE, González-Sapienza G, Burt SK, Ventura ON.
Journal: Cell Mol Biol (Noisy-le-grand). 49(6):973-83
- MUTAGEN: multi-user tool for annotating genomes.
by Brügger K, Redder P, Skovgaard M.
Journal: Bioinformatics. 19(18):2480-1
- The ion transporter superfamily.
by Prakash S, Cooper G, Singhi S, Saier MH.
Journal: Biochim Biophys Acta. 1618(1):79-92
- A complete set of SNAREs in yeast.
by Burri L, Lithgow T.
Journal: Traffic. 5(1):45-52
- ORFDB: an information resource linking scientific content to a high-quality Open Reading Frame (ORF) collection.
by Liang F, Matrubutham U, Parvizi B, Yen J, Duan D, Mirchandani J, Hashima S, Nguyen U, Ubil E, Loewenheim J, Yu X, Sipes S, Williams W, Wang L, Bennett R, Carrino J.
Journal: Nucleic Acids Res. 32 Database issue:D595-9
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