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More December, 2003 bioinformatics journal articles.- Analysis of gene expression profiles: an application of memetic algorithms to the minimum sum-of-squares clustering problem.
by Merz P.
Journal: Biosystems. 72(1-2):99-109
- Using electrostatic potentials to predict DNA-binding sites on DNA-binding proteins.
by Jones S, Shanahan HP, Berman HM, Thornton JM.
Journal: Nucleic Acids Res. 31(24):7189-98
- A BAC-based physical map of the chicken genome.
by Ren C, Lee MK, Yan B, Ding K, Cox B, Romanov MN, Price JA, Dodgson JB, Zhang HB.
Journal: Genome Res. 13(12):2754-8
- Fugu ESTs: new resources for transcription analysis and genome annotation.
by Clark MS, Edwards YJ, Peterson D, Clifton SW, Thompson AJ, Sasaki M, Suzuki Y, Kikuchi K, Watabe S, Kawakami K, Sugano S, Elgar G, Johnson SL.
Journal: Genome Res. 11 2003;13(12):2747-53
- Development of a porcine brain cDNA library, EST database, and microarray resource.
by Nobis W, Ren X, Suchyta SP, Suchyta TR, Zanella AJ, Coussens PM.
Journal: Physiol Genomics. 12 2003;16(1):153-9
- FLAGdb++: a database for the functional analysis of the Arabidopsis genome.
by Samson F, Brunaud V, Duchêne S, De Oliveira Y, Caboche M, Lecharny A, Aubourg S.
Journal: Nucleic Acids Res. 32 Database issue:D347-50
- Automatic prediction of protein function.
by Rost B, Liu J, Nair R, Wrzeszczynski KO, Ofran Y.
Journal: Cell Mol Life Sci. 60(12):2637-50
- AANT: the Amino Acid-Nucleotide Interaction Database.
by Hoffman MM, Khrapov MA, Cox JC, Yao J, Tong L, Ellington AD.
Journal: Nucleic Acids Res. 32 Database issue:D174-81
- Windex: a toolset for indexing helices.
by Ward A, Moody MF, Sheehan B, Milligan RA, Carragher B.
Journal: J Struct Biol. 2003 Oct-Nov;144(1-2):172-83
- Evolving strategies for the incorporation of bioinformatics within the undergraduate cell biology curriculum.
by Honts JE.
Journal: Cell Biol Educ. 2003 Winter;2(4):233-47
- Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome.
by Zhang Z, Harrison PM, Liu Y, Gerstein M.
Journal: Genome Res. 13(12):2541-58
- MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics.
by Schoof H, Ernst R, Nazarov V, Pfeifer L, Mewes HW, Mayer KF.
Journal: Nucleic Acids Res. 32 Database issue:D373-6
- The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
by Kopp J, Schwede T.
Journal: Nucleic Acids Res. 32 Database issue:D230-4
- Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique.
by Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Pühler A, Meyer F.
Journal: J Biotechnol. 106(2-3):121-33
- Evaluation of protein fold comparison servers.
by Novotny M, Madsen D, Kleywegt GJ.
Journal: Proteins. 54(2):260-70
- dictyBase: a new Dictyostelium discoideum genome database.
by Kreppel L, Fey P, Gaudet P, Just E, Kibbe WA, Chisholm RL, Kimmel AR.
Journal: Nucleic Acids Res. 32 Database issue:D332-3
- Efficiency improvement of peptide identification for an organism without complete genome sequence, using expressed sequence tag database and tandem mass spectral data.
by Kwon KH, Kim M, Kim JY, Kim KW, Kim SI, Park YM, Yoo JS.
Journal: Proteomics. 3(12):2305-9
- Effective scoring function for protein sequence design.
by Liang S, Grishin NV.
Journal: Proteins. 54(2):271-81
- Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis.
by Cánovas D, Cases I, de Lorenzo V.
Journal: Environ Microbiol. 5(12):1242-56
- The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology.
by Camon E, Magrane M, Barrell D, Lee V, Dimmer E, Maslen J, Binns D, Harte N, Lopez R, Apweiler R.
Journal: Nucleic Acids Res. 32 Database issue:D262-6
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