More December, 2003 bioinformatics journal articles.- [A method for delineation of domains in proteins based on refolding free energy--application to continuous and discontinuous domains]
by Xie ZQ, Xu GJ.
Journal: Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 35(12):1090-8
- ProVal: a protein-scoring function for the selection of native and near-native folds.
by Berglund A, Head RD, Welsh EA, Marshall GR.
Journal: Proteins. 54(2):289-302
- EyeSite: a semi-automated database of protein families in the eye.
by Lee DA, Fefeu S, Edo-Ukeh AA, Orengo CA, Slingsby C.
Journal: Nucleic Acids Res. 32 Database issue:D148-52
- GermOnline, a new cross-species community annotation database on germ-line development and gametogenesis.
by Primig M, Wiederkehr C, Basavaraj R, Sarrauste de Menthi?ère C, Hermida L, Koch R, Schlecht U, Dickinson HG, Fellous M, Grootegoed JA, Hawley RS, Jégou B, Maro B, Nicolas A, Orr-Weaver T, Schedl T, Villeneuve A, Wolgemuth DJ, Yamamoto M, Zickler D, Lamb N, Esposito RE.
Journal: Nat Genet. 35(4):291-2
- Using electrostatic potentials to predict DNA-binding sites on DNA-binding proteins.
by Jones S, Shanahan HP, Berman HM, Thornton JM.
Journal: Nucleic Acids Res. 31(24):7189-98
- ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins.
by Hotelier T, Renault L, Cousin X, Negre V, Marchot P, Chatonnet A.
Journal: Nucleic Acids Res. 32 Database issue:D145-7
- Systems biology markup language: Level 2 and beyond.
by Finney A, Hucka M.
Journal: Biochem Soc Trans. 31(Pt 6):1472-3
- Random Boolean network models and the yeast transcriptional network.
by Kauffman S, Peterson C, Samuelsson B, Troein C.
Journal: Proc Natl Acad Sci U S A. 12 2003;100(25):14796-9
- Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences.
by Krebs WG, Tsai J, Alexandrov V, Junker J, Jansen R, Gerstein M.
Journal: Methods Enzymol. 374:544-84
- Mapping of ESTs derived from pre-implantation stage cattle embryos to allocate 16 new additions to the ordered comparative map of cattle and human.
by Mamo S, Wimmers K, Gilles M, Kata SR, Schellander K, Ponsuksili S.
Journal: Anim Genet. 34(6):449-52
- 3D-GENOMICS: a database to compare structural and functional annotations of proteins between sequenced genomes.
by Fleming K, Müller A, MacCallum RM, Sternberg MJ.
Journal: Nucleic Acids Res. 32 Database issue:D245-50
- Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.
by Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H.
Journal: Genome Res. 13(12):2736-46
- Bioinformatic insight into the unity and diversity of cytochromes P450.
by Lisitsa A, Archakov A, Lewi P, Janssen P.
Journal: Methods Find Exp Clin Pharmacol. 25(9):733-45
- Toxicogenomics in drug development.
by Guerreiro N, Staedtler F, Grenet O, Kehren J, Chibout SD.
Journal: Toxicol Pathol. 2003 Sep-Oct;31(5):471-9
- A novel database of disulfide patterns and its application to the discovery of distantly related homologs.
by van Vlijmen HW, Gupta A, Narasimhan LS, Singh J.
Journal: J Mol Biol. 335(4):1083-92
- TropGENE-DB, a multi-tropical crop information system.
by Ruiz M, Rouard M, Raboin LM, Lartaud M, Lagoda P, Courtois B.
Journal: Nucleic Acids Res. 32 Database issue:D364-7
- Evaluation of common gene expression patterns in the rat nervous system.
by Kaiser S, Nisenbaum LK.
Journal: Physiol Genomics. 12 2003;16(1):1-7
- SGMD: the Soybean Genomics and Microarray Database.
by Alkharouf NW, Matthews BF.
Journal: Nucleic Acids Res. 32 Database issue:D398-400
- Reliable classification of two-class cancer data using evolutionary algorithms.
by Deb K, Raji Reddy A.
Journal: Biosystems. 72(1-2):111-29
- HGVbase: a curated resource describing human DNA variation and phenotype relationships.
by Fredman D, Munns G, Rios D, Sjöholm F, Siegfried M, Lenhard B, Lehväslaiho H, Brookes AJ.
Journal: Nucleic Acids Res. 32 Database issue:D516-9
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