More December, 2003 bioinformatics journal articles.- [Gene prediction and function research of SARS-CoV(BJ01)]
by Chen TG, Wu SF, Wan P, Du CJ, Li JQ, Li D, Wei GZ, Li B, Wang ZS, Xue XF, Zhu YP, He FC.
Journal: Yi Chuan Xue Bao. 30(8):773-80
- dictyBase: a new Dictyostelium discoideum genome database.
by Kreppel L, Fey P, Gaudet P, Just E, Kibbe WA, Chisholm RL, Kimmel AR.
Journal: Nucleic Acids Res. 32 Database issue:D332-3
- PIRSF: family classification system at the Protein Information Resource.
by Wu CH, Nikolskaya A, Huang H, Yeh LS, Natale DA, Vinayaka CR, Hu ZZ, Mazumder R, Kumar S, Kourtesis P, Ledley RS, Suzek BE, Arminski L, Chen Y, Zhang J, Cardenas JL, Chung S, Castro-Alvear J, Dinkov G, Barker WC.
Journal: Nucleic Acids Res. 32 Database issue:D112-4
- Recent improvements to the PROSITE database.
by Hulo N, Sigrist CJ, Le Saux V, Langendijk-Genevaux PS, Bordoli L, Gattiker A, De Castro E, Bucher P, Bairoch A.
Journal: Nucleic Acids Res. 32 Database issue:D134-7
- Assigning function to yeast proteins by integration of technologies.
by Hazbun TR, Malmström L, Anderson S, Graczyk BJ, Fox B, Riffle M, Sundin BA, Aranda JD, McDonald WH, Chiu CH, Snydsman BE, Bradley P, Muller EG, Fields S, Baker D, Yates JR, Davis TN.
Journal: Mol Cell. 12(6):1353-65
- GRASP2: visualization, surface properties, and electrostatics of macromolecular structures and sequences.
by Petrey D, Honig B.
Journal: Methods Enzymol. 374:492-509
- Tracking EcoKI and DNA fifty years on: a golden story full of surprises.
by Loenen WA.
Journal: Nucleic Acids Res. 31(24):7059-69
- Automatic solution of heavy-atom substructures.
by Weeks CM, Adams PD, Berendzen J, Brunger AT, Dodson EJ, Grosse-Kunstleve RW, Schneider TR, Sheldrick GM, Terwilliger TC, Turkenburg MG, Usón I.
Journal: Methods Enzymol. 374:37-83
- Petri Net representations in systems biology.
by Pinney JW, Westhead DR, McConkey GA.
Journal: Biochem Soc Trans. 31(Pt 6):1513-5
- Hembase: browser and genome portal for hematology and erythroid biology.
by Goh SH, Lee YT, Bouffard GG, Miller JL.
Journal: Nucleic Acids Res. 32 Database issue:D572-4
- Rice Proteome Database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003.
by Komatsu S, Kojima K, Suzuki K, Ozaki K, Higo K.
Journal: Nucleic Acids Res. 32 Database issue:D388-92
- Finding unexpected patterns in microarray data.
by Perelman S, Mazzella MA, Muschietti J, Zhu T, Casal JJ.
Journal: Plant Physiol. 133(4):1717-25
- Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences.
by Jensen MA, Li FS, van 't Wout AB, Nickle DC, Shriner D, He HX, McLaughlin S, Shankarappa R, Margolick JB, Mullins JI.
Journal: J Virol. 77(24):13376-88
- The Eukaryotic Promoter Database EPD: the impact of in silico primer extension.
by Schmid CD, Praz V, Delorenzi M, Périer R, Bucher P.
Journal: Nucleic Acids Res. 32 Database issue:D82-5
- Systems biology. Tracing life's circuitry.
by Pennisi E.
Journal: Science. 302(5651):1646-9
- PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
by Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T.
Journal: Nucleic Acids Res. 32 Database issue:D484-8
- IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data.
by Kaas Q, Ruiz M, Lefranc MP.
Journal: Nucleic Acids Res. 32 Database issue:D208-10
- Sequence and structural analysis of cellular retinoic acid-binding proteins reveals a network of conserved hydrophobic interactions.
by Gunasekaran K, Hagler AT, Gierasch LM.
Journal: Proteins. 54(2):179-94
- yMGV: a cross-species expression data mining tool.
by Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P.
Journal: Nucleic Acids Res. 32 Database issue:D323-5
- An extended commentary on "Models and regulatory considerations for transient temperature rise during diagnostic ultrasound pulses" by Herman and Harris (2002).
by Miller MW, Dewey WC.
Journal: Ultrasound Med Biol. 29(11):1653-9; author response 1661-2
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