More December, 2003 bioinformatics journal articles.- Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.
by Christie KR, Weng S, Balakrishnan R, Costanzo MC, Dolinski K, Dwight SS, Engel SR, Feierbach B, Fisk DG, Hirschman JE, Hong EL, Issel-Tarver L, Nash R, Sethuraman A, Starr B, Theesfeld CL, Andrada R, Binkley G, Dong Q, Lane C, Schroeder M, Botstein D, Cherry JM.
Journal: Nucleic Acids Res. 32 Database issue:D311-4
- AANT: the Amino Acid-Nucleotide Interaction Database.
by Hoffman MM, Khrapov MA, Cox JC, Yao J, Tong L, Ellington AD.
Journal: Nucleic Acids Res. 32 Database issue:D174-81
- MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics.
by Schoof H, Ernst R, Nazarov V, Pfeifer L, Mewes HW, Mayer KF.
Journal: Nucleic Acids Res. 32 Database issue:D373-6
- Toxicogenomics in drug development.
by Guerreiro N, Staedtler F, Grenet O, Kehren J, Chibout SD.
Journal: Toxicol Pathol. 2003 Sep-Oct;31(5):471-9
- Role and experience determine decision support interface requirements in a neonatal intensive care environment.
by Ewing G, Freer Y, Logie R, Hunter J, McIntosh N, Rudkin S, Ferguson L.
Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):240-9
- Complete, annotated sequence of the pseudorabies virus genome.
by Klupp BG, Hengartner CJ, Mettenleiter TC, Enquist LW.
Journal: J Virol. 78(1):424-40
- The EMBL Nucleotide Sequence Database.
by Kulikova T, Aldebert P, Althorpe N, Baker W, Bates K, Browne P, van den Broek A, Cochrane G, Duggan K, Eberhardt R, Faruque N, Garcia-Pastor M, Harte N, Kanz C, Leinonen R, Lin Q, Lombard V, Lopez R, Mancuso R, McHale M, Nardone F, Silventoinen V, Stoehr P, Stoesser G, Tuli MA, Tzouvara K, Vaughan R, Wu D, Zhu W, Apweiler R.
Journal: Nucleic Acids Res. 32 Database issue:D27-30
- Does recombination shape the distribution and evolution of tandemly arrayed genes (TAGs) in the Arabidopsis thaliana genome?
by Zhang L, Gaut BS.
Journal: Genome Res. 13(12):2533-40
- Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.
by Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H.
Journal: Genome Res. 13(12):2736-46
- The ion transporter superfamily.
by Prakash S, Cooper G, Singhi S, Saier MH.
Journal: Biochim Biophys Acta. 1618(1):79-92
- Full-malaria 2004: an enlarged database for comparative studies of full-length cDNAs of malaria parasites, Plasmodium species.
by Watanabe J, Suzuki Y, Sasaki M, Sugano S.
Journal: Nucleic Acids Res. 32 Database issue:D334-8
- The Arabidopsis KAKTUS gene encodes a HECT protein and controls the number of endoreduplication cycles.
by El Refy A, Perazza D, Zekraoui L, Valay JG, Bechtold N, Brown S, Hülskamp M, Herzog M, Bonneville JM.
Journal: Mol Genet Genomics. 10 2003;270(5):403-14
- ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins.
by Hotelier T, Renault L, Cousin X, Negre V, Marchot P, Chatonnet A.
Journal: Nucleic Acids Res. 32 Database issue:D145-7
- Phylogenomic analysis and evolution of the potassium channel gene family.
by Moulton G, Attwood TK, Parry-Smith DJ, Packer JC.
Journal: Receptors Channels. 9(6):363-77
- SURFACE: a database of protein surface regions for functional annotation.
by Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M.
Journal: Nucleic Acids Res. 32 Database issue:D240-4
- Petri Net representations in systems biology.
by Pinney JW, Westhead DR, McConkey GA.
Journal: Biochem Soc Trans. 31(Pt 6):1513-5
- 3D-GENOMICS: a database to compare structural and functional annotations of proteins between sequenced genomes.
by Fleming K, Müller A, MacCallum RM, Sternberg MJ.
Journal: Nucleic Acids Res. 32 Database issue:D245-50
- An efficient algorithm for mining closed itemsets.
by Liu JQ, Pan YH.
Journal: J Zhejiang Univ Sci. 5(1):8-15
- TransportDB: a relational database of cellular membrane transport systems.
by Ren Q, Kang KH, Paulsen IT.
Journal: Nucleic Acids Res. 32 Database issue:D284-8
- Maize genome sequencing by methylation filtration.
by Palmer LE, Rabinowicz PD, O'Shaughnessy AL, Balija VS, Nascimento LU, Dike S, de la Bastide M, Martienssen RA, McCombie WR.
Journal: Science. 302(5653):2115-7
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