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More December, 2003 bioinformatics journal articles.- PFIT and PFRIT: bioinformatic algorithms for detecting glycosidase function from structure and sequence.
by Kleiger G, Panina EM, Mallick P, Eisenberg D.
Journal: Protein Sci. 13(1):221-9
- IMGT-ONTOLOGY and IMGT databases, tools and Web resources for immunogenetics and immunoinformatics.
by Lefranc MP.
Journal: Mol Immunol. 40(10):647-60
- PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
by Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T.
Journal: Nucleic Acids Res. 32 Database issue:D484-8
- Visualization and interpretation of protein networks in Mycobacterium tuberculosis based on hierarchical clustering of genome-wide functional linkage maps.
by Strong M, Graeber TG, Beeby M, Pellegrini M, Thompson MJ, Yeates TO, Eisenberg D.
Journal: Nucleic Acids Res. 31(24):7099-109
- AppaDB: an AcedB database for the nematode satellite organism Pristionchus pacificus.
by Srinivasan J, Otto GW, Kahlow U, Geisler R, Sommer RJ.
Journal: Nucleic Acids Res. 32 Database issue:D421-2
- Automatic prediction of protein function.
by Rost B, Liu J, Nair R, Wrzeszczynski KO, Ofran Y.
Journal: Cell Mol Life Sci. 60(12):2637-50
- Functional Genomics: all the king's horses and all the king's men can put Humpty together again.
by Oliver S.
Journal: Mol Cell. 12(6):1343-4
- GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
by Visel A, Thaller C, Eichele G.
Journal: Nucleic Acids Res. 32 Database issue:D552-6
- Random Boolean network models and the yeast transcriptional network.
by Kauffman S, Peterson C, Samuelsson B, Troein C.
Journal: Proc Natl Acad Sci U S A. 12 2003;100(25):14796-9
- Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences.
by Krebs WG, Tsai J, Alexandrov V, Junker J, Jansen R, Gerstein M.
Journal: Methods Enzymol. 374:544-84
- Proteomic analysis for early detection of ovarian cancer: a realistic approach?
by Stevens EV, Liotta LA, Kohn EC.
Journal: Int J Gynecol Cancer. 2003 Nov-Dec;13 Suppl 2:133-9
- dictyBase: a new Dictyostelium discoideum genome database.
by Kreppel L, Fey P, Gaudet P, Just E, Kibbe WA, Chisholm RL, Kimmel AR.
Journal: Nucleic Acids Res. 32 Database issue:D332-3
- Building nursing knowledge through informatics: from concept representation to data mining.
by Bakken S, Hardiker NR.
Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):229-31
- Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteins.
by Kuhn M, Meiler J, Baker D.
Journal: Proteins. 54(2):282-8
- The microRNA Registry.
by Griffiths-Jones S.
Journal: Nucleic Acids Res. 32 Database issue:D109-11
- Evaluation of common gene expression patterns in the rat nervous system.
by Kaiser S, Nisenbaum LK.
Journal: Physiol Genomics. 12 2003;16(1):1-7
- DomIns: a web resource for domain insertions in known protein structures.
by Selvam RA, Sasidharan R.
Journal: Nucleic Acids Res. 32 Database issue:D193-5
- Mapping of ESTs derived from pre-implantation stage cattle embryos to allocate 16 new additions to the ordered comparative map of cattle and human.
by Mamo S, Wimmers K, Gilles M, Kata SR, Schellander K, Ponsuksili S.
Journal: Anim Genet. 34(6):449-52
- DSDBASE: a consortium of native and modelled disulphide bonds in proteins.
by Vinayagam A, Pugalenthi G, Rajesh R, Sowdhamini R.
Journal: Nucleic Acids Res. 32 Database issue:D200-2
- Photosynthetic acclimation is reflected in specific patterns of gene expression in drought-stressed loblolly pine.
by Watkinson JI, Sioson AA, Vasquez-Robinet C, Shukla M, Kumar D, Ellis M, Heath LS, Ramakrishnan N, Chevone B, Watson LT, van Zyl L, Egertsdotter U, Sederoff RR, Grene R.
Journal: Plant Physiol. 133(4):1702-16
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