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More December, 2003 bioinformatics journal articles.- A new pairwise folding potential based on improved decoy generation and side-chain packing.
by Loose C, Klepeis JL, Floudas CA.
Journal: Proteins. 54(2):303-14
- The ORFanage: an ORFan database.
by Siew N, Azaria Y, Fischer D.
Journal: Nucleic Acids Res. 32 Database issue:D281-3
- Tracking EcoKI and DNA fifty years on: a golden story full of surprises.
by Loenen WA.
Journal: Nucleic Acids Res. 31(24):7059-69
- The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli.
by Sundararaj S, Guo A, Habibi-Nazhad B, Rouani M, Stothard P, Ellison M, Wishart DS.
Journal: Nucleic Acids Res. 32 Database issue:D293-5
- Petri Net representations in systems biology.
by Pinney JW, Westhead DR, McConkey GA.
Journal: Biochem Soc Trans. 31(Pt 6):1513-5
- Xpro: database of eukaryotic protein-encoding genes.
by Gopalan V, Tan TW, Lee BT, Ranganathan S.
Journal: Nucleic Acids Res. 32 Database issue:D59-63
- Cloning and characterization of the human IFT20 gene.
by Yin G, Dai J, Ji C, Ni X, Shu G, Ye X, Dai J, Wu Q, Gu S, Xie Y, Zhao RC, Mao Y.
Journal: Mol Biol Rep. 30(4):255-60
- DEG: a database of essential genes.
by Zhang R, Ou HY, Zhang CT.
Journal: Nucleic Acids Res. 32 Database issue:D271-2
- Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences.
by Jensen MA, Li FS, van 't Wout AB, Nickle DC, Shriner D, He HX, McLaughlin S, Shankarappa R, Margolick JB, Mullins JI.
Journal: J Virol. 77(24):13376-88
- Amplification and overexpression of the IGF2 regulator PLAG1 in hepatoblastoma.
by Zatkova A, Rouillard JM, Hartmann W, Lamb BJ, Kuick R, Eckart M, von Schweinitz D, Koch A, Fonatsch C, Pietsch T, Hanash SM, Wimmer K.
Journal: Genes Chromosomes Cancer. 39(2):126-37
- The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology.
by Camon E, Magrane M, Barrell D, Lee V, Dimmer E, Maslen J, Binns D, Harte N, Lopez R, Apweiler R.
Journal: Nucleic Acids Res. 32 Database issue:D262-6
- The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface.
by Chen J, Zhao P, Massaro D, Clerch LB, Almon RR, DuBois DC, Jusko WJ, Hoffman EP.
Journal: Nucleic Acids Res. 32 Database issue:D578-81
- Human protein reference database as a discovery resource for proteomics.
by Peri S, Navarro JD, Kristiansen TZ, Amanchy R, Surendranath V, Muthusamy B, Gandhi TK, Chandrika KN, Deshpande N, Suresh S, Rashmi BP, Shanker K, Padma N, Niranjan V, Harsha HC, Talreja N, Vrushabendra BM, Ramya MA, Yatish AJ, Joy M, Shivashankar HN, Kavitha MP, Menezes M, Choudhury DR, Ghosh N, Saravana R, Chandran S, Mohan S, Jonnalagadda CK, Prasad CK, Kumar-Sinha C, Deshpande KS, Pandey A.
Journal: Nucleic Acids Res. 32 Database issue:D497-501
- Systems biology. Tracing life's circuitry.
by Pennisi E.
Journal: Science. 302(5651):1646-9
- The microRNA Registry.
by Griffiths-Jones S.
Journal: Nucleic Acids Res. 32 Database issue:D109-11
- Genomic analysis in the sting-2 quantitative trait locus for defensive behavior in the honey bee, Apis mellifera.
by Lobo NF, Ton LQ, Hill CA, Emore C, Romero-Severson J, Hunt GJ, Collins FH.
Journal: Genome Res. 13(12):2588-93
- The European ribosomal RNA database.
by Wuyts J, Perrière G, Van De Peer Y.
Journal: Nucleic Acids Res. 32 Database issue:D101-3
- GeneDB: a resource for prokaryotic and eukaryotic organisms.
by Hertz-Fowler C, Peacock CS, Wood V, Aslett M, Kerhornou A, Mooney P, Tivey A, Berriman M, Hall N, Rutherford K, Parkhill J, Ivens AC, Rajandream MA, Barrell B.
Journal: Nucleic Acids Res. 32 Database issue:D339-43
- Nucleotide frequency variation across human genes.
by Louie E, Ott J, Majewski J.
Journal: Genome Res. 11 2003;13(12):2594-601
- SGMD: the Soybean Genomics and Microarray Database.
by Alkharouf NW, Matthews BF.
Journal: Nucleic Acids Res. 32 Database issue:D398-400
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