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More December, 2003 bioinformatics journal articles.- Genomic analysis in the sting-2 quantitative trait locus for defensive behavior in the honey bee, Apis mellifera.
by Lobo NF, Ton LQ, Hill CA, Emore C, Romero-Severson J, Hunt GJ, Collins FH.
Journal: Genome Res. 13(12):2588-93
- The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data.
by Porter CT, Bartlett GJ, Thornton JM.
Journal: Nucleic Acids Res. 32 Database issue:D129-33
- A complete set of SNAREs in yeast.
by Burri L, Lithgow T.
Journal: Traffic. 5(1):45-52
- Maize genome sequencing by methylation filtration.
by Palmer LE, Rabinowicz PD, O'Shaughnessy AL, Balija VS, Nascimento LU, Dike S, de la Bastide M, Martienssen RA, McCombie WR.
Journal: Science. 302(5653):2115-7
- Analysis and modelling of signal transduction pathways in systems biology.
by Cho KH, Wolkenhauer O.
Journal: Biochem Soc Trans. 31(Pt 6):1503-9
- SCOR: Structural Classification of RNA, version 2.0.
by Tamura M, Hendrix DK, Klosterman PS, Schimmelman NR, Brenner SE, Holbrook SR.
Journal: Nucleic Acids Res. 32 Database issue:D182-4
- The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface.
by Chen J, Zhao P, Massaro D, Clerch LB, Almon RR, DuBois DC, Jusko WJ, Hoffman EP.
Journal: Nucleic Acids Res. 32 Database issue:D578-81
- Photosynthetic acclimation is reflected in specific patterns of gene expression in drought-stressed loblolly pine.
by Watkinson JI, Sioson AA, Vasquez-Robinet C, Shukla M, Kumar D, Ellis M, Heath LS, Ramakrishnan N, Chevone B, Watson LT, van Zyl L, Egertsdotter U, Sederoff RR, Grene R.
Journal: Plant Physiol. 133(4):1702-16
- MUTAGEN: multi-user tool for annotating genomes.
by Brügger K, Redder P, Skovgaard M.
Journal: Bioinformatics. 19(18):2480-1
- Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes.
by Wylie T, Martin JC, Dante M, Mitreva MD, Clifton SW, Chinwalla A, Waterston RH, Wilson RK, McCarter JP.
Journal: Nucleic Acids Res. 32 Database issue:D423-6
- LIFEdb: a database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system.
by Bannasch D, Mehrle A, Glatting KH, Pepperkok R, Poustka A, Wiemann S.
Journal: Nucleic Acids Res. 32 Database issue:D505-8
- Cloning and characterization of the human IFT20 gene.
by Yin G, Dai J, Ji C, Ni X, Shu G, Ye X, Dai J, Wu Q, Gu S, Xie Y, Zhao RC, Mao Y.
Journal: Mol Biol Rep. 30(4):255-60
- Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era.
by Kell DB, Oliver SG.
Journal: Bioessays. 26(1):99-105
- coliBASE: an online database for Escherichia coli, Shigella and Salmonella comparative genomics.
by Chaudhuri RR, Khan AM, Pallen MJ.
Journal: Nucleic Acids Res. 32 Database issue:D296-9
- Bayesian networks for knowledge discovery in large datasets: basics for nurse researchers.
by Lee SM, Abbott PA.
Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):389-99
- VirGen: a comprehensive viral genome resource.
by Kulkarni-Kale U, Bhosle S, Manjari GS, Kolaskar AS.
Journal: Nucleic Acids Res. 32 Database issue:D289-92
- Nitric oxide-mediated transcriptional changes in Arabidopsis thaliana.
by Polverari A, Molesini B, Pezzotti M, Buonaurio R, Marte M, Delledonne M.
Journal: Mol Plant Microbe Interact. 16(12):1094-105
- Random Boolean network models and the yeast transcriptional network.
by Kauffman S, Peterson C, Samuelsson B, Troein C.
Journal: Proc Natl Acad Sci U S A. 12 2003;100(25):14796-9
- Simplicial neighborhood analysis of protein packing (SNAPP): a computational geometry approach to studying proteins.
by Tropsha A, Carter CW, Cammer S, Vaisman II.
Journal: Methods Enzymol. 374:509-44
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