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| Journal Articles Details
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| Bioinformatics Journals and Computational Biology Journals |
| J Virol. 77(24):13376-88 |
Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences. |
Jensen MA, Li FS, van 't Wout AB, Nickle DC, Shriner D, He HX, McLaughlin S, Shankarappa R, Margolick JB, Mullins JI.
Department of Microbiology, University of Washington, Seattle, Washington 98195-8070, USA. majensen@u.washington.edu |
Publication Date: Wednesday, December 03, 2003
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Click here to view MEDLINE citation |
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More December, 2003 bioinformatics journal articles.- Gene length and proximity to neighbors affect genome-wide expression levels.
by Chiaromonte F, Miller W, Bouhassira EE. Journal: Genome Res. 11 2003;13(12):2602-8
- The distribution and query systems of the RCSB Protein Data Bank.
by Bourne PE, Addess KJ, Bluhm WF, Chen L, Deshpande N, Feng Z, Fleri W, Green R, Merino-Ott JC, Townsend-Merino W, Weissig H, Westbrook J, Berman HM. Journal: Nucleic Acids Res. 32 Database issue:D223-5
- TrSDB: a proteome database of transcription factors.
by Hermoso A, Aguilar D, Aviles FX, Querol E. Journal: Nucleic Acids Res. 32 Database issue:D171-3
- Automatic solution of heavy-atom substructures.
by Weeks CM, Adams PD, Berendzen J, Brunger AT, Dodson EJ, Grosse-Kunstleve RW, Schneider TR, Sheldrick GM, Terwilliger TC, Turkenburg MG, Usón I. Journal: Methods Enzymol. 374:37-83
- Systems biology. Tracing life's circuitry.
by Pennisi E. Journal: Science. 302(5651):1646-9
- Fugu ESTs: new resources for transcription analysis and genome annotation.
by Clark MS, Edwards YJ, Peterson D, Clifton SW, Thompson AJ, Sasaki M, Suzuki Y, Kikuchi K, Watabe S, Kawakami K, Sugano S, Elgar G, Johnson SL. Journal: Genome Res. 11 2003;13(12):2747-53
- Gene expression in sheep skin and wool (hair).
by Adelson DL, Cam GR, DeSilva U, Franklin IR. Journal: Genomics. 83(1):95-105
- FLAGdb++: a database for the functional analysis of the Arabidopsis genome.
by Samson F, Brunaud V, Duchêne S, De Oliveira Y, Caboche M, Lecharny A, Aubourg S. Journal: Nucleic Acids Res. 32 Database issue:D347-50
- Evaluation of the draft international standard for a reference terminology model for nursing actions.
by Moss J, Coenen A, Mills ME. Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):271-8
- MUTAGEN: multi-user tool for annotating genomes.
by Brügger K, Redder P, Skovgaard M. Journal: Bioinformatics. 19(18):2480-1
- Gene structure prediction in syntenic DNA segments.
by Moore JE, Lake JA. Journal: Nucleic Acids Res. 31(24):7271-9
- UniProt: the Universal Protein knowledgebase.
by Apweiler R, Bairoch A, Wu CH, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, Magrane M, Martin MJ, Natale DA, O'Donovan C, Redaschi N, Yeh LS. Journal: Nucleic Acids Res. 32 Database issue:D115-9
- MolliGen, a database dedicated to the comparative genomics of Mollicutes.
by Barré A, de Daruvar A, Blanchard A. Journal: Nucleic Acids Res. 32 Database issue:D307-10
- Does recombination shape the distribution and evolution of tandemly arrayed genes (TAGs) in the Arabidopsis thaliana genome?
by Zhang L, Gaut BS. Journal: Genome Res. 13(12):2533-40
- Using electrostatic potentials to predict DNA-binding sites on DNA-binding proteins.
by Jones S, Shanahan HP, Berman HM, Thornton JM. Journal: Nucleic Acids Res. 31(24):7189-98
- DBSubLoc: database of protein subcellular localization.
by Guo T, Hua S, Ji X, Sun Z. Journal: Nucleic Acids Res. 32 Database issue:D122-4
- Using computational modeling to transform nursing data into actionable information.
by Effken JA, Brewer BB, Patil A, Lamb GS, Verran JA, Carley KM. Journal: J Biomed Inform. 2003 Aug-Oct;36(4-5):351-61
- Structural bioinformatics study of EPSP synthase from Mycobacterium tuberculosis.
by Pereira JH, Canduri F, de Oliveira JS, da Silveira NJ, Basso LA, Palma MS, de Azevedo WF, Santos DS. Journal: Biochem Biophys Res Commun. 312(3):608-14
- The SUPERFAMILY database in 2004: additions and improvements.
by Madera M, Vogel C, Kummerfeld SK, Chothia C, Gough J. Journal: Nucleic Acids Res. 32 Database issue:D235-9
- Windex: a toolset for indexing helices.
by Ward A, Moody MF, Sheehan B, Milligan RA, Carragher B. Journal: J Struct Biol. 2003 Oct-Nov;144(1-2):172-83
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