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More December, 2003 bioinformatics journal articles.- Fugu ESTs: new resources for transcription analysis and genome annotation.
by Clark MS, Edwards YJ, Peterson D, Clifton SW, Thompson AJ, Sasaki M, Suzuki Y, Kikuchi K, Watabe S, Kawakami K, Sugano S, Elgar G, Johnson SL.
Journal: Genome Res. 11 2003;13(12):2747-53
- GRASP2: visualization, surface properties, and electrostatics of macromolecular structures and sequences.
by Petrey D, Honig B.
Journal: Methods Enzymol. 374:492-509
- Finding unexpected patterns in microarray data.
by Perelman S, Mazzella MA, Muschietti J, Zhu T, Casal JJ.
Journal: Plant Physiol. 133(4):1717-25
- Visualization and interpretation of protein networks in Mycobacterium tuberculosis based on hierarchical clustering of genome-wide functional linkage maps.
by Strong M, Graeber TG, Beeby M, Pellegrini M, Thompson MJ, Yeates TO, Eisenberg D.
Journal: Nucleic Acids Res. 31(24):7099-109
- IMGT-ONTOLOGY and IMGT databases, tools and Web resources for immunogenetics and immunoinformatics.
by Lefranc MP.
Journal: Mol Immunol. 40(10):647-60
- A BAC-based physical map of the chicken genome.
by Ren C, Lee MK, Yan B, Ding K, Cox B, Romanov MN, Price JA, Dodgson JB, Zhang HB.
Journal: Genome Res. 13(12):2754-8
- Molecular classification of cancer types from microarray data using the combination of genetic algorithms and support vector machines.
by Peng S, Xu Q, Ling XB, Peng X, Du W, Chen L.
Journal: FEBS Lett. 555(2):358-62
- Characterization of a novel splicing variant of KLHL5, a member of the kelch protein family.
by Xu J, Gu S, Wang S, Dai J, Ji C, Jin Y, Qian J, Wang L, Ye X, Xie Y, Mao Y.
Journal: Mol Biol Rep. 30(4):239-42
- RPG: the Ribosomal Protein Gene database.
by Nakao A, Yoshihama M, Kenmochi N.
Journal: Nucleic Acids Res. 32 Database issue:D168-70
- Update of NUREBASE: nuclear hormone receptor functional genomics.
by Ruau D, Duarte J, Ourjdal T, Perrière G, Laudet V, Robinson-Rechavi M.
Journal: Nucleic Acids Res. 32 Database issue:D165-7
- E-MSD: an integrated data resource for bioinformatics.
by Golovin A, Oldfield TJ, Tate JG, Velankar S, Barton GJ, Boutselakis H, Dimitropoulos D, Fillon J, Hussain A, Ionides JM, John M, Keller PA, Krissinel E, McNeil P, Naim A, Newman R, Pajon A, Pineda J, Rachedi A, Copeland J, Sitnov A, Sobhany S, Suarez-Uruena A, Swaminathan GJ, Tagari M, Tromm S, Vranken W, Henrick K.
Journal: Nucleic Acids Res. 32 Database issue:D211-6
- Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology.
by Goesmann A, Linke B, Rupp O, Krause L, Bartels D, Dondrup M, McHardy AC, Wilke A, Pühler A, Meyer F.
Journal: J Biotechnol. 106(2-3):157-67
- HERVd: the Human Endogenous RetroViruses Database: update.
by Paces J, Pavlícek A, Zika R, Kapitonov VV, Jurka J, Paces V.
Journal: Nucleic Acids Res. 32 Database issue:D50
- Systems biology markup language: Level 2 and beyond.
by Finney A, Hucka M.
Journal: Biochem Soc Trans. 31(Pt 6):1472-3
- Using electrostatic potentials to predict DNA-binding sites on DNA-binding proteins.
by Jones S, Shanahan HP, Berman HM, Thornton JM.
Journal: Nucleic Acids Res. 31(24):7189-98
- LIFEdb: a database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system.
by Bannasch D, Mehrle A, Glatting KH, Pepperkok R, Poustka A, Wiemann S.
Journal: Nucleic Acids Res. 32 Database issue:D505-8
- SOLVE and RESOLVE: automated structure solution and density modification.
by Terwilliger TC.
Journal: Methods Enzymol. 374:22-37
- Automatic solution of heavy-atom substructures.
by Weeks CM, Adams PD, Berendzen J, Brunger AT, Dodson EJ, Grosse-Kunstleve RW, Schneider TR, Sheldrick GM, Terwilliger TC, Turkenburg MG, Usón I.
Journal: Methods Enzymol. 374:37-83
- The Rice PIPELINE: a unification tool for plant functional genomics.
by Yazaki J, Kojima K, Suzuki K, Kishimoto N, Kikuchi S.
Journal: Nucleic Acids Res. 32 Database issue:D383-7
- ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins.
by Hotelier T, Renault L, Cousin X, Negre V, Marchot P, Chatonnet A.
Journal: Nucleic Acids Res. 32 Database issue:D145-7
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