Comparative evaluation of current peptide production platforms used in absolute quantification in proteomics.
by Mirzaei H, McBee J, Watts J, Aebersold R.
Affliation: Institute of Molecular Systems Biology, Zurich 8093.
Journal: Mol Cell Proteomics. :
Publication Date: Wednesday, December 19, 2007
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Maturation of Streptococcus pneumoniae lipoproteins by a type II signal peptidase is required for ABC transporter function and full virulence.
by Khandavilli S, Homer KA, Yuste J, Basavanna S, Mitchell T, Brown JS.
Affliation: Centre for Respiratory Research, Department of Medicine, Royal Free and University College Medical School, Rayne Institute, London WC1E 6JJ, UK.
Journal: Mol Microbiol. :
Publication Date: Tuesday, December 18, 2007
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The Phb1/2 phospho-complex is required for mitochondrial homeostasis and survival of human T cells.
by Ross JA, Nagy ZS, Kirken RA.
Affliation: Biological Sciences, University of Texas at El Paso, El Paso, TX 79902.
Journal: J Biol Chem. :
Publication Date: Tuesday, December 18, 2007
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Hsp60 regulation of tumor cell apoptosis.
by Ghosh JC, Dohi T, Kang BH, Altieri DC.
Affliation: Cancer Biology, University of Massachusetts Medical School, Worcester, MA 01605.
Journal: J Biol Chem. :
Publication Date: Tuesday, December 18, 2007
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EGFR And PDGFR Differentially Promote Growth In Malignant Epitheloid Mesothelioma Of Short- And Long-term Survivors.
by Kothmaier H, Quehenberger F, Halbwedl I, Morbini P, Demirag F, Zeren H, Comin CE, Murer B, Cagle PT, Attanoos R, Gibbs AR, Gallateau-Salle F, Popper HH.
Affliation: Institute of Pathology, Medical University of Graz, Austria.
Journal: Thorax. :
Publication Date: Tuesday, December 18, 2007
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Toward an understanding of the molecular mechanism for successfully blood-feeding by proteomics analysis coupling with pharmacological testing of horse fly salivary glands.
by Xu X, Yang H, Ma D, Wu J, Wang Y, Song Y, Wang X, Lu Y, Yang J, Lai R.
Affliation: Biotoxin Department, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223.
Journal: Mol Cell Proteomics. :
Publication Date: Tuesday, December 18, 2007
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Quantitative proteomics reveals regulation of dynamic components within TATA-binding protein (TBP) transcription complexes.
by Mousson F, Kolkman A, Pijnappel WW, Timmers HT, Heck AJ.
Affliation: Pharmmaceutical Sciences, Utrecht University, Utrecht 3584 CA.
Journal: Mol Cell Proteomics. :
Publication Date: Tuesday, December 18, 2007
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ANIBAL - Stable-isotope-based quantitative proteomics by ANIline and Benzoic acid labeling of amino and carboxylic groups.
by Panchaud A, Hansson J, Affolter M, Bel Rhlid R, Piu S, Moreillon P, Kussmann M.
Affliation: Functional Genomics Group, Lausanne CH-1000.
Journal: Mol Cell Proteomics. :
Publication Date: Monday, December 17, 2007
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Denoising inferred functional association networks obtained by gene fusion analysis.
by Kamburov A, Goldovsky L, Freilich S, Kapazoglou A, Kunin V, Enright AJ, Tsaftaris A, Ouzounis CA.
Affliation:
Journal: BMC Genomics. 8(1):460
Publication Date: Monday, December 17, 2007
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Proteomic study of the effects of complex environmental stresses in the livers of goldfish (Carassius auratus) that inhabit Gaobeidian Lake in Beijing, China.
by Wang J, Wei Y, Wang D, Chan LL, Dai J.
Affliation: Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, P.R. China, daijy@ioz.ac.cn.
Journal: Ecotoxicology. :
Publication Date: Monday, December 17, 2007
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Developing strategies for detection of gene doping.
by Baoutina A, Alexander IE, Rasko JE, Emslie KR.
Affliation: National Measurement Institute, 1 Suakin St, Pymble, NSW 2073, Australia.
Journal: J Gene Med. 10(1):3-20
Publication Date: Monday, December 17, 2007
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Developmental fate determination and marker discovery in hematopoietic stem cell biology using proteomic fingerprinting.
by Spooncer E, Brouard N, Nilsson SK, Williams B, Liu MC, Unwin RD, Blinco D, Jaworska E, Simmons PJ, Whetton AD.
Affliation: The Faculty of Medical and Human Sciences, University of Manchester, Manchester M20 4QL.
Journal: Mol Cell Proteomics. :
Publication Date: Monday, December 17, 2007
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Statistical Validation of Peptide Identifications in Large-Scale Proteomics Using the Target-Decoy Database Search Strategy and Flexible Mixture Modeling.
by Choi H, Ghosh D, Nesvizhskii AI.
Affliation: nesvi@med.umich.edu.
Journal: J Proteome Res. :
Publication Date: Friday, December 14, 2007
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Residue-Specific Radical-Directed Dissociation of Whole Proteins in the Gas Phase.
by Ly T, Julian RR.
Affliation: Department of Chemistry, University of California, Riverside, California 92521.
Journal: J Am Chem Soc. :
Publication Date: Friday, December 14, 2007
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Sparse inverse covariance estimation with the graphical lasso.
by Friedman J, Hastie T, Tibshirani R.
Affliation: Department of Statistics, Stanford University, CA 94305, USA.
Journal: Biostatistics. :
Publication Date: Friday, December 14, 2007
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Intracellular complexes of the 2 subunit of the nicotinic acetylcholine receptor in brain identified by proteomics.
by Kabbani N, Woll MP, Levenson R, Lindstrom JM, Changeux JP.
Affliation: Récepteurs et Cognition, Centre National de la Recherche Scientifique Unité de Recherche Associée 2182, Institut Pasteur, 75724 Paris, France;
Journal: Proc Natl Acad Sci U S A. :
Publication Date: Thursday, December 13, 2007
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The biological impact of mass-spectrometry-based proteomics.
by Cravatt BF, Simon GM, Yates JR.
Affliation: Department of Chemical Physiology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA. cravatt@scripps.edu
Journal: Nature. 450(7172):991-1000
Publication Date: Thursday, December 13, 2007
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A Proteome Resource of Ovarian Cancer Ascites: Integrated Proteomic and Bioinformatic Analyses To Identify Putative Biomarkers.
by Gortzak-Uzan L, Ignatchenko A, Evangelou AI, Agochiya M, Brown KA, St Onge P, Kireeva I, Schmitt-Ulms G, Brown TJ, Murphy J, Rosen B, Shaw P, Jurisica I, Kislinger T.
Affliation: thomas.kislinger@utoronto.ca, juris@ai.utoronto.ca.
Journal: J Proteome Res. :
Publication Date: Thursday, December 13, 2007
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On the analysis of glycomics mass spectrometry data via the regularized area under the ROC curve.
by Ye J, Liu H, Kirmiz C, Lebrilla CB, Rocke DM.
Affliation:
Journal: BMC Bioinformatics. 8(1):477
Publication Date: Thursday, December 13, 2007
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Toward chromatographic analysis of interacting protein networks.
by Liu X, Yang WC, Gao Q, Regnier F.
Affliation: Department of Chemistry, Purdue University, West Lafayette IN 47907, USA.
Journal: J Chromatogr A. :
Publication Date: Thursday, December 13, 2007
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