Useful mass spectrometry programs freely available on the internet.
by Matthiesen R.
Affliation:
Journal: Methods Mol Biol. 367:303-6
Publication Date: Friday, December 22, 2006
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Genome annotating proteomics pipelines: available tools.
by Shadforth I, Bessant C.
Affliation: Cranfield University, Cranfield Health, Silsoe, MK45 4DT, UK. ian.shadforth@cranfield.ac.uk
Journal: Expert Rev Proteomics. 3(6):621-9
Publication Date: Thursday, December 21, 2006
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Contribution of mass spectrometry-based proteomics to immunology.
by Hillen N, Stevanovic S.
Affliation: University of Tübingen, Department of Immunology, Institute for Cell Biology, 72076 Tübingen, Germany. nina.hillen@uni-tuebingen.de
Journal: Expert Rev Proteomics. 3(6):653-64
Publication Date: Thursday, December 21, 2006
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Global Gene Expression Profiling of Bacillus subtilis in Response to Ammonium and Tryptophan Starvation as Revealed by Transcriptome and Proteome Analysis.
by Tam le T, Eymann C, Antelmann H, Albrecht D, Hecker M.
Affliation: Institut fur Mikrobiologie, Ernst-Moritz-Arndt-Universitat Greifswald, Greifswald, Germany.
Journal: J Mol Microbiol Biotechnol. 12(1-2):121-30
Publication Date: Thursday, December 21, 2006
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Metabolomics of a superorganism.
by Goodacre R.
Affliation: School of Chemistry and Manchester Interdisciplinary Biocentre, University of Manchester, Manchester M1 7ND, United Kingdom.
Journal: J Nutr. 137(1):259S-66S
Publication Date: Thursday, December 21, 2006
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The Biological Revolution: Understanding the Impact of SNPs on Diet-Cancer Interrelationships.
by Mathers JC, Hesketh JE.
Affliation: Human Nutrition Research Centre, School of Clinical Medical Sciences and 5Human Nutrition Research Centre, Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Journal: J Nutr. 137(1):253S-8S
Publication Date: Thursday, December 21, 2006
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Identification of proteins whose expression is up- or down-regulated in the mushroom bodies in the honeybee brain using proteomics.
by Uno Y, Fujiyuki T, Morioka M, Takeuchi H, Kubo T.
Affliation: Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan.
Journal: FEBS Lett. :
Publication Date: Thursday, December 21, 2006
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Protein labeling by iTRAQ: A new tool for quantitative mass spectrometry in proteome research.
by Wiese S, Reidegeld KA, Meyer HE, Warscheid B.
Affliation: Medizinisches Proteom-Center, Ruhr-Universität Bochum, Bochum, Germany.
Journal: Proteomics. :
Publication Date: Wednesday, December 20, 2006
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Quantitative proteomics analysis of the secretory pathway.
by Gilchrist A, Au CE, Hiding J, Bell AW, Fernandez-Rodriguez J, Lesimple S, Nagaya H, Roy L, Gosline SJ, Hallett M, Paiement J, Kearney RE, Nilsson T, Bergeron JJ.
Affliation: Department of Anatomy and Cell Biology, McGill University, 3640 University Street, Montreal, Quebec H3A 2B2, Canada.
Journal: Cell. 127(6):1265-81
Publication Date: Monday, December 18, 2006
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Use of monolithic supports in proteomics technology.
by Josic D, Clifton JG.
Affliation: Proteomics Core, COBRE Center for Cancer Research Development, Rhode Island Hospital, CORO West, One Hoppin St., Providence, RI 02903, USA.
Journal: J Chromatogr A. :
Publication Date: Monday, December 18, 2006
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From glycomics to functional glycomics of sugar chains: Identification of target proteins with functional changes using gene targeting mice and knock down cells of FUT8 as examples.
by Kondo A, Li W, Nakagawa T, Nakano M, Koyama N, Wang X, Gu J, Miyoshi E, Taniguchi N.
Affliation: Department of Glycotherapeutics, Osaka University Graduate School of Medicine, Osaka 565-0871, Japan.
Journal: Biochim Biophys Acta. 1764(12):1881-9
Publication Date: Monday, December 18, 2006
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Potential applications and limitations of proteomics in the study of neurological disease.
by Kinoshita Y, Uo T, Jayadev S, Garden GA, Conrads TP, Veenstra TD, Morrison RS.
Affliation: Author Affiliations: Departments of Neurological Surgery and Neurology, and The Center for Neurogenetics and Neurotherapeutics, University of Washington School of Medicine, Seattle;
Journal: Arch Neurol. 63(12):1692-6
Publication Date: Monday, December 18, 2006
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Computational proteomics of biomolecular interactions in the sequence and structure space of the tyrosine kinome: Deciphering the molecular basis of the kinase inhibitors selectivity.
by Verkhivker GM.
Affliation: Department of Pharmacology, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093-0392.
Journal: Proteins. :
Publication Date: Monday, December 18, 2006
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Tagging and detection strategies for activity-based proteomics.
by Sadaghiani AM, Verhelst SH, Bogyo M.
Affliation: Department of Pathology and.
Journal: Curr Opin Chem Biol. :
Publication Date: Monday, December 18, 2006
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Proteomic expression analysis of cardiomyocytes subjected to proteasome inhibition.
by Doll D, Sarikas A, Krajcik R, Zolk O.
Affliation: Institute of Experimental and Clinical Pharmacology and Toxicology, University of Erlangen-Nuremberg, Fahrstr. 17, 91054 Erlangen, Germany.
Journal: Biochem Biophys Res Commun. :
Publication Date: Monday, December 18, 2006
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A proteomics approach for identifying osmotic-stress-related proteins in rice.
by Zang X, Komatsu S.
Affliation: National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba 305-8602, Japan.
Journal: Phytochemistry. :
Publication Date: Friday, December 15, 2006
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Identification of Novel Peptide Safety Markers for Exocrine Pancreatic Toxicity Induced by Cyanohydroxybutene (CHB).
by Walgren JL, Mitchell MD, Whiteley LO, Thompson DC.
Affliation: Pfizer Global Research and Development, Drug Safety Research and Development, 700 Chesterfield Parkway West, Mail Zone T1A, Chesterfiled, MO 63017.
Journal: Toxicol Sci. :
Publication Date: Friday, December 15, 2006
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Nomenclature and structural biology of allergens.
by Chapman MD, Pomés A, Breiteneder H, Ferreira F.
Affliation: From Indoor Biotechnologies, Inc, Charlottesville.
Journal: J Allergy Clin Immunol. :
Publication Date: Thursday, December 14, 2006
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Mass measurement accuracy in analyses of highly complex mixtures based upon multidimensional recalibration.
by Tolmachev AV, Monroe ME, Jaitly N, Petyuk VA, Adkins JN, Smith RD.
Affliation: Biological Sciences Division, Pacific Northwest National Laboratory, P.O. Box 999, Richland, Washington 99352.
Journal: Anal Chem. 78(24):8374-85
Publication Date: Thursday, December 14, 2006
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Fragmentation of Singly Protonated Peptides via a Combination of Infrared and Collisional Activation.
by Dodds ED, Hagerman PJ, Lebrilla CB.
Affliation: Department of Chemistry, and School of Medicine, Department of Biochemistry and Molecular Medicine, University of California Davis, One Shields Avenue, Davis, California 95616.
Journal: Anal Chem. 78(24):8506-8511
Publication Date: Thursday, December 14, 2006
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