Strategies for high-throughput gene cloning and expression.
by Dieckman LJ, Hanly WC, Collart ER.
Affliation: Biosciences Division, Argonne National Laboratory, Argonne, Illinois 60439, USA.
Journal: Genet Eng (N Y). 27:179-90
Publication Date: Friday, December 30, 2005
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Genes for Small, Noncoding RNAs under Sporulation Control in Bacillus subtilis.
by Silvaggi JM, Perkins JB, Losick R.
Affliation: Department of Molecular and Cellular Biology, The Biological Laboratories, 16 Divinity Ave., Harvard University, Cambridge, MA 02138. losick@mcb.harvard.edu.
Journal: J Bacteriol. 188(2):532-41
Publication Date: Friday, December 30, 2005
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From genomics to chemical genomics: new developments in KEGG.
by Kanehisa M, Goto S, Hattori M, Aoki-Kinoshita KF, Itoh M, Kawashima S, Katayama T, Araki M, Hirakawa M.
Affliation: Bioinformatics Center, Institute for Chemical Research, Kyoto University Uji, Kyoto 611-0011, Japan.
Journal: Nucleic Acids Res. 34(Database issue):D354-7
Publication Date: Thursday, December 29, 2005
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Megx.net--database resources for marine ecological genomics.
by Lombardot T, Kottmann R, Pfeffer H, Richter M, Teeling H, Quast C, Glöckner FO.
Affliation: Microbial Genomics Group, Max Planck Institute for Marine Microbiology D-28359 Bremen, Germany.
Journal: Nucleic Acids Res. 34(Database issue):D390-3
Publication Date: Thursday, December 29, 2005
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ShiBASE: an integrated database for comparative genomics of Shigella.
by Yang J, Chen L, Yu J, Sun L, Jin Q.
Affliation: State Key Laboratory for Molecular Virology and Genetic Engineering Beijing 100176, China.
Journal: Nucleic Acids Res. 34(Database issue):D398-401
Publication Date: Thursday, December 29, 2005
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TcruziDB: an integrated, post-genomics community resource for Trypanosoma cruzi.
by Agüero F, Zheng W, Weatherly DB, Mendes P, Kissinger JC.
Affliation: Instituto de Investigaciones Biotecnológicas, Universidad de San Martín San Martín, B 1650 KNA, Buenos Aires, Argentina.
Journal: Nucleic Acids Res. 34(Database issue):D428-31
Publication Date: Thursday, December 29, 2005
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Genolevures complete genomes provide data and tools for comparative genomics of hemiascomycetous yeasts.
by Sherman D, Durrens P, Iragne F, Beyne E, Nikolski M, Souciet JL.
Affliation: LaBRI, Laboratoire Bordelais de Recherche en Informatique, UMR CNRS 5800 351 cours de la Libération, 33405 Talence cedex, France.
Journal: Nucleic Acids Res. 34(Database issue):D432-5
Publication Date: Thursday, December 29, 2005
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Phytophthora functional genomics database (PFGD): functional genomics of phytophthora-plant interactions.
by Gajendran K, Gonzales MD, Farmer A, Archuleta E, Win J, Waugh ME, Kamoun S.
Affliation: National Center for Genome Resources Santa Fe, NM, USA.
Journal: Nucleic Acids Res. 34(Database issue):D465-70
Publication Date: Thursday, December 29, 2005
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SGCEdb: a flexible database and web interface integrating experimental results and analysis for structural genomics focusing on Caenorhabditis elegans.
by Johnson DH, Tsao J, Luo M, Carson M.
Affliation: Center for Biophysical Sciences and Engineering, University of Alabama at Birmingham Birmingham, AL, USA.
Journal: Nucleic Acids Res. 34(Database issue):D471-4
Publication Date: Thursday, December 29, 2005
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WormBase: better software, richer content.
by Schwarz EM, Antoshechkin I, Bastiani C, Bieri T, Blasiar D, Canaran P, Chan J, Chen N, Chen WJ, Davis P, Fiedler TJ, Girard L, Harris TW, Kenny EE, Kishore R, Lawson D, Lee R, Müller HM, Nakamura C, Ozersky P, Petcherski A, Rogers A, Spooner W, Tuli MA, Van Auken K, Wang D, Durbin R, Spieth J, Stein LD, Sternberg PW.
Affliation: Division of Biology 156-29 California Institute of Technology Pasadena, CA, 91125, USA.
Journal: Nucleic Acids Res. 34(Database issue):D475-8
Publication Date: Thursday, December 29, 2005
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StellaBase: The Nematostella vectensis Genomics Database.
by Sullivan JC, Ryan JF, Watson JA, Webb J, Mullikin JC, Rokhsar D, Finnerty JR.
Affliation: Department of Biology, Boston University 5 Cummington Street, Boston, MA 02215, USA.
Journal: Nucleic Acids Res. 34(Database issue):D495-9
Publication Date: Thursday, December 29, 2005
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TreeFam: a curated database of phylogenetic trees of animal gene families.
by Li H, Coghlan A, Ruan J, Coin LJ, Hériché JK, Osmotherly L, Li R, Liu T, Zhang Z, Bolund L, Wong GK, Zheng W, Dehal P, Wang J, Durbin R.
Affliation: Beijing Institute of Genomics of the Chinese Academy of Sciences, Beijing Genomics Institute Beijing 101300, China.
Journal: Nucleic Acids Res. 34(Database issue):D572-80
Publication Date: Thursday, December 29, 2005
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QTL MatchMaker: a multi-species quantitative trait loci (QTL) database and query system for annotation of genes and QTL.
by Star KV, Song Q, Zhu A, Böttinger EP.
Affliation: Albert Einstein College of Medicine One Gustave L. Levy Place, Box 1243, New York, NY 10029, USA.
Journal: Nucleic Acids Res. 34(Database issue):D586-9
Publication Date: Thursday, December 29, 2005
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The UCSC Genome Browser Database: update 2006.
by Hinrichs AS, Karolchik D, Baertsch R, Barber GP, Bejerano G, Clawson H, Diekhans M, Furey TS, Harte RA, Hsu F, Hillman-Jackson J, Kuhn RM, Pedersen JS, Pohl A, Raney BJ, Rosenbloom KR, Siepel A, Smith KE, Sugnet CW, Sultan-Qurraie A, Thomas DJ, Trumbower H, Weber RJ, Weirauch M, Zweig AS, Haussler D, Kent WJ.
Affliation: Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz (UCSC) Santa Cruz, CA 95064, USA.
Journal: Nucleic Acids Res. 34(Database issue):D590-8
Publication Date: Thursday, December 29, 2005
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Phytome: a platform for plant comparative genomics.
by Hartmann S, Lu D, Phillips J, Vision TJ.
Affliation: Department of Biology, University of North Carolina at Chapel Hill Chapel Hill, NC 27599, USA.
Journal: Nucleic Acids Res. 34(Database issue):D724-30
Publication Date: Thursday, December 29, 2005
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OryGenesDB: a database for rice reverse genetics.
by Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel JB, Dievart A, Courtois B, Guiderdoni E, Périn C.
Affliation: CIRAD, UMR PIA 1096 TA 40/03 Avenue Agropolis 34398 Montpellier Cedex 5, France.
Journal: Nucleic Acids Res. 34(Database issue):D736-40
Publication Date: Thursday, December 29, 2005
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The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.
by Ohyanagi H, Tanaka T, Sakai H, Shigemoto Y, Yamaguchi K, Habara T, Fujii Y, Antonio BA, Nagamura Y, Imanishi T, Ikeo K, Itoh T, Gojobori T, Sasaki T.
Affliation: Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems 1111 Yata, Mishima, Shizuoka 411-8540, Japan.
Journal: Nucleic Acids Res. 34(Database issue):D741-4
Publication Date: Thursday, December 29, 2005
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Ethical guidelines in genetics and genomics. An Islamic perspective.
by Al-Aqeel AI.
Affliation: Department of Pediatrics, Armed Forces Hospital, PO Box 7897, Riyadh 11159, Kingdom of Saudi Arabia. Tel. +966 (1) 4777714 Ext. 5452. Fax. +966 (1) 4762121. E-mail: alaqeela1@hotmail.com.
Journal: Saudi Med J. 26(12):1862-70
Publication Date: Wednesday, December 28, 2005
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Metabolomics reviewed: a new "omics" platform technology for systems biology and implications for natural products research.
by Rochfort S.
Affliation: Environmental Health and Chemistry, Department of Primary Industries, Primary Industries Research Victoria-Werribee Centre, Victoria, Australia.
Journal: J Nat Prod. 68(12):1813-20
Publication Date: Tuesday, December 27, 2005
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Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes.
by Friedrich MW.
Affliation: Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch-Strasse, D-35043 Marburg, Germany.
Journal: Curr Opin Biotechnol. :
Publication Date: Monday, December 26, 2005
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