Complexity Reduction of Polymorphic Sequences (CRoPStrade mark): A Novel Approach for Large-Scale Polymorphism Discovery in Complex Genomes.
by van Orsouw NJ, Hogers RC, Janssen A, Yalcin F, Snoeijers S, Verstege E, Schneiders H, van der Poel H, van Oeveren J, Verstegen H, van Eijk MJ.
Affliation: Keygene NV, Wageningen, The Netherlands.
Journal: PLoS ONE. 2(11):e1172
Publication Date: Wednesday, November 14, 2007
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Improving model construction of profile HMMs for remote homology detection through structural alignment.
by Bernardes JS, Davila AM, Costa VS, Zaverucha G.
Affliation:
Journal: BMC Bioinformatics. 8(1):435
Publication Date: Wednesday, November 14, 2007
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An optimized procedure greatly improves EST vector contamination removal.
by Chen YA, Lin CC, Wang CD, Wu HB, Hwang PI.
Affliation:
Journal: BMC Genomics. 8(1):416
Publication Date: Tuesday, November 13, 2007
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A bioinformatics and experimental analysis of proteins of two-component systems in Myxococcus xanthus.
by Shi X, Wegener-Feldbrügge S, Huntley S, Hamann N, Hedderich R, Søgaard-Andersen L.
Affliation: Department of Ecophysiology, Max Planck Institute for Terrestrial Microbiology, Karl-von-Frisch Str., 35043 Marburg, Germany.
Journal: J Bacteriol. :
Publication Date: Monday, November 12, 2007
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AutoMotif Server for prediction of phosphorylation sites in proteins using support vector machine: 2007 update.
by Plewczynski D, Tkacz A, Wyrwicz LS, Rychlewski L, Ginalski K.
Affliation: Interdisciplinary Centre for Mathematical and Computational Modeling, University of Warsaw, Pawinskiego 5a, 02-106, Warsaw, Poland, D.Plewczynski@icm.edu.pl.
Journal: J Mol Model. :
Publication Date: Monday, November 12, 2007
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Ganoderma lucidum polysaccharides in human monocytic leukemia cells: from gene expression to network construction.
by Cheng KC, Huang HC, Chen JH, Hsu JW, Cheng HC, Ou CH, Yang WB, Chen ST, Wong CH, Juan HF.
Affliation:
Journal: BMC Genomics. 8(1):411
Publication Date: Monday, November 12, 2007
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A novel peptide sequence in perlecan domain IV supports cell adhesion, spreading and FAK activation.
by Farach-Carson MC, Brown AJ, Lynam M, Safran JB, Carson DD.
Affliation: Department of Biological Sciences, University of Delaware, Newark, DE, 19716 USA.
Journal: Matrix Biol. :
Publication Date: Monday, November 12, 2007
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On the Reliable Identification of Plant Sequences Containing a Polyadenylation Site.
by Havukkala I, Vanderlooy S.
Affliation: KEDRI, Auckland University of Technology, Auckland, New Zealand.
Journal: J Comput Biol. :
Publication Date: Friday, November 09, 2007
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Genetics and reverse epidemiology among patients on chronic hemodialysis.
by Balakrishnan VS, Rao M.
Affliation: Division of Nephrology, Tufts-New England Medical Center, Boston, Massachusetts, USA.
Journal: Semin Dial. 2007 Nov-Dec;20(6):570-6
Publication Date: Friday, November 09, 2007
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Building the bridges to bioinformatics in nutrition research.
by Lemay DG, Zivkovic AM, German JB.
Affliation: Department of Food Science and Technology, University of California, Davis, CA, and Nestlé Research Centre, Lausanne, Switzerland.
Journal: Am J Clin Nutr. 86(5):1261-9
Publication Date: Friday, November 09, 2007
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The Obesity-Associated FTO Gene Encodes a 2-Oxoglutarate Dependent Nucleic Acid Demethylase.
by Gerken T, Girard CA, Tung YC, Webby CJ, Saudek V, Hewitson KS, Yeo GS, McDonough MA, Cunliffe S, McNeill LA, Galvanovskis J, Rorsman P, Robins P, Prieur X, Coll AP, Ma M, Jovanovic Z, Farooqi IS, Sedgwick B, Barroso I, Lindahl T, Ponting CP, Ashcroft FM, O'Rahilly S, Schofield CJ.
Affliation: Chemistry Research Laboratory and Oxford Centre for Integrative Systems Biology, University of Oxford, 12 Mansfield Road, Oxford, Oxon OX1 3TA, UK.
Journal: Science. :
Publication Date: Friday, November 09, 2007
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Human MIP synthase splice variants in bipolar disorder.
by Shamir A, Shaltiel G, Mark S, Bersudsky Y, Belmaker RH, Agam G.
Affliation: Faculty of Health Sciences, Ben Gurion University of the Negev and Mental Health Center, Beer Sheva, Israel.
Journal: Bipolar Disord. 9(7):766-71
Publication Date: Thursday, November 08, 2007
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Revisiting adverse effects of cross-hybridization in Affymetrix gene expression data: do they matter for correlation analysis?
by Klebanov L, Chen L, Yakovlev A.
Affliation:
Journal: Biol Direct. 2(1):28
Publication Date: Thursday, November 08, 2007
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Support Vector Machine based classification of protein folds using the structural properties of amino acid residues and amino acid residue pairs.
by Shamim MT, Anwaruddin M, Nagarajaram HA.
Affliation: Laboratory of Computational Biology, Centre for DNA Fingerprinting and Diagnostics, Hyderabad 500 076, India.
Journal: Bioinformatics. :
Publication Date: Thursday, November 08, 2007
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Statistical methods to infer cooperative binding among transcription factors in Saccharomyces cerevisiae.
by Datta D, Zhao H.
Affliation: Department of Biomedical Engineering,Yale University,New Haven,CT 06520.
Journal: Bioinformatics. :
Publication Date: Thursday, November 08, 2007
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Improving Women's Health Through Modernization of Our Bioinformatics Infrastructure.
by Oliva A, Pinnow E, Levin R, Uhl K.
Affliation: 1Office of Critical Path Programs, Food and Drug Administration, Rockville, Maryland, USA.
Journal: Clin Pharmacol Ther. :
Publication Date: Wednesday, November 07, 2007
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Circuit assemblages derived from net dinucleotide values provide a succinct identity for the HIV-1 genome and each of its genes.
by Lang DM.
Affliation: School of Contemporary Sciences, University of Abertay-Dundee, Bell Street, Dundee, DD1 1HG, Scotland, UK.
Journal: Virus Genes. :
Publication Date: Wednesday, November 07, 2007
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[Systems biology can radically change health care. Basis for individualized prediction, prevention and treatment]
by Benson M, Cardell LO, Hohmann S, Jirstrand M, Langston M, Mobini R, Nerman O.
Affliation: Drottning Silvias barn- och ungdomssjukhus, Göteborg.
Journal: Lakartidningen. 2007 Oct 17-23;104(42):3037-41
Publication Date: Wednesday, November 07, 2007
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[Systems biology makes detailed understanding of complex diseases possible. Arteriosclerosis is an example]
by Björkegren J, Tegnér J.
Affliation: Karolinska Universitetssjukhuset Solna. johan.bjorkegren@ki.se
Journal: Lakartidningen. 2007 Oct 17-23;104(42):3042-5
Publication Date: Wednesday, November 07, 2007
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CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.
by Baumbach J.
Affliation:
Journal: BMC Bioinformatics. 8(1):429
Publication Date: Wednesday, November 07, 2007
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