Current trends in the bioinformatic sequence analysis of metabolic pathways in prokaryotes.
by Brilli M, Fani R, Liò P.
Affliation:
Journal: Brief Bioinform. :
Publication Date: Tuesday, November 20, 2007
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Identification of functional domains in Arabidopsis thaliana mRNA decapping enzyme (AtDcp2).
by Gunawardana D, Cheng HC, Gayler KR.
Affliation: Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria 3010, Australia.
Journal: Nucleic Acids Res. :
Publication Date: Tuesday, November 20, 2007
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MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes.
by Cantarel BL, Korf I, Robb SM, Parra G, Ross E, Moore B, Holt C, Sánchez Alvarado A, Yandell M.
Affliation: Eccles Institute of Human Genetics, University of Utah, Salt Lake City, Utah 84112, USA;
Journal: Genome Res. :
Publication Date: Tuesday, November 20, 2007
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Use of genomic DNA control features and predicted operon structure in microarray data analysis: ArrayLeaRNA - a Bayesian approach.
by Pin C, Reuter M.
Affliation:
Journal: BMC Bioinformatics. 8(1):455
Publication Date: Tuesday, November 20, 2007
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The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications.
by Bare JC, Shannon PT, Schmid AK, Baliga NS.
Affliation:
Journal: BMC Bioinformatics. 8(1):456
Publication Date: Tuesday, November 20, 2007
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Low folding propensity and high translation efficiency distinguish in vivo substrates of GroEL from other E. coli proteins.
by Noivirt-Brik O, Unger R, Horovitz A.
Affliation: Department of Structural Biology, Weizmann Institute, Rehovot 76100, Israel.
Journal: Bioinformatics. :
Publication Date: Friday, November 16, 2007
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Autoantibody Approach for Serum-Based Detection of Head and Neck Cancer.
by Lin HS, Talwar HS, Tarca AL, Ionan A, Chatterjee M, Ye B, Wojciechowski J, Mohapatra S, Basson MD, Yoo GH, Peshek B, Lonardo F, Pan CJ, Folbe AJ, Draghici S, Abrams J, Tainsky MA.
Affliation: Department of Otolaryngology/Head and Neck Surgery, Wayne State University, 5 East University Health Center, 4201 St. Antoine, Detroit, MI 48201. hlin@med.wayne.edu.
Journal: Cancer Epidemiol Biomarkers Prev. 16(11):2396-2405
Publication Date: Friday, November 16, 2007
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TMBpro: Secondary Structure, {beta}-contact, and Tertiary Structure Prediction of Transmembrane {beta}-Barrel Proteins.
by Randall A, Cheng J, Sweredoski M, Baldi P.
Affliation: School of Information and Computer Sciences, University of California, Irvine, CA, 92697.
Journal: Bioinformatics. :
Publication Date: Friday, November 16, 2007
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Extended-Hungarian-JPDA: exact single-frame stem cell tracking.
by Kachouie NN, Fieguth PW.
Affliation: Department of Systems Design Engineering, University of Waterloo, 200 University Avenue, West, Waterloo, ON N2L 3G1, Canada. nnezamod@engmail.uwaterloo.ca
Journal: IEEE Trans Biomed Eng. 54(11):2011-9
Publication Date: Friday, November 16, 2007
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Microarray image compression using a variation of singular value decomposition.
by Peters TJ, Smolikova-Wachowiak R, Wachowiak MP.
Affliation: Department of Computer Science and Mathematics, Nipissing University, North Bay, ON P1B 8L7 Canada. e-mail: tjpeters482@community.nipissingu.ca.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:1176-9
Publication Date: Friday, November 16, 2007
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Prediction of Specific Protein-DNA Recognition by Knowledge-based Two-body and Three-body Interaction Potentials.
by Zhao G, Carson MB, Lu H.
Affliation: Bioinformatics Program, Department of Bioengineering, University of Ilinois at Chicago, Chicago, IL 60607 USA.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:5017-20
Publication Date: Friday, November 16, 2007
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Computing topological parameters of biological networks.
by Assenov Y, Ramírez F, Schelhorn SE, Lengauer T, Albrecht M.
Affliation: Department of Computational Biology and Applied Algorithmics, Max Planck Institute for Informatics, Stuhlsatzenhausweg 85, 66123 Saarbrücken, German.
Journal: Bioinformatics. :
Publication Date: Friday, November 16, 2007
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Correction: Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts.
by Toedling J, Skylar O, Krueger T, Fischer JJ, Sperling S, Huber W.
Affliation:
Journal: BMC Bioinformatics. 8(1):443
Publication Date: Friday, November 16, 2007
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Text processing through Web services: Calling Whatizit.
by Rebholz-Schuhmann D, Arregui M, Gaudan S, Kirsch H, Yepes AJ.
Affliation: European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, U.K.
Journal: Bioinformatics. :
Publication Date: Friday, November 16, 2007
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Protein structure mining using a structural alphabet.
by Tyagi M, de Brevern AG, Srinivasan N, Offmann B.
Affliation: Laboratoire de Biochimie et Génétique Moléculaire, Bioinformatics Team, Université de La Réunion, BP 7151, 15 avenue René Cassin, 97715 Saint Denis Messag Cedex 09, La Réunion, France.
Journal: Proteins. :
Publication Date: Thursday, November 15, 2007
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Pro-inflammatory Effects of Advanced Lipoxidation End Products in Monocytes.
by Shanmugam N, Figarola JL, Li Y, Swiderski PM, Rahbar S, Natarajan R.
Affliation: Department of Diabetes.
Journal: Diabetes. :
Publication Date: Thursday, November 15, 2007
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Crystal structure and functional analysis identify the P-loop containing protein YFH7 of Saccharomyces cerevisiae as an ATP-dependent kinase.
by Gueguen-Chaignon V, Chaptal V, Larivière L, Costa N, Lopes P, Morera S, Nessler S.
Affliation: Laboratoire d'Enzymologie et Biochimie Structurales, CNRS, 1 av. de la terrasse, 91 198 Gif-sur Yvette, France.
Journal: Proteins. :
Publication Date: Thursday, November 15, 2007
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Microarray Simulator as Educational Tool.
by Ruusuvuori P, Nykter M, Makiraatikka E, Lehmussola A, Korpelainen T, Erkkila T, Yli-Harja O.
Affliation: Institute of Signal Processing, Tampere University of Technology, P.O.Box 553, 33101 Tampere, Finland. pekka.ruusuvuori@tut.fi.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:5919-5922
Publication Date: Thursday, November 15, 2007
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Arrhythmogenesis Research: A Perspective from Computational Electrophysiology Viewpoint.
by Trayanova N, Plank G.
Affliation: Johns Hopkins University, Baltimore, MD, USA.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:406-409
Publication Date: Thursday, November 15, 2007
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[RNA interference and its clinical applications.]
by Munkácsy G, Tulassay Z, Gyorffy B.
Affliation: MTA-SE Gyermekgyógyászati és Nephrológiai Kutatócsoport Budapest Bókay u. 53–54. 1083.
Journal: Orv Hetil. 148(47):2235-2240
Publication Date: Thursday, November 15, 2007
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