Codon-triplet context unveils unique features of the Candida albicans protein coding genome.
by Moura GR, Lousado JP, Pinheiro M, Carreto L, Silva RM, Oliveira JL, Santos MA.
Affliation:
Journal: BMC Genomics. 8(1):444
Publication Date: Friday, November 30, 2007
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Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition.
by Tamura T, Akutsu T.
Affliation:
Journal: BMC Bioinformatics. 8(1):466
Publication Date: Friday, November 30, 2007
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Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations.
by Kim H, Park H, Drake BL.
Affliation: College of Computing, Georgia Institute of Technology, Atlanta, GA 30332, USA. hskim@cc.gatech.edu
Journal: BMC Bioinformatics. 8 Suppl 9:S6
Publication Date: Friday, November 30, 2007
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Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society.
by Wilkins D, Gusev Y, Loganantharaj R, Bridges S, Winters-Hilt S, Wren JD.
Affliation: Computer & Information Science Department, The University of Mississippi, University, MS, USA. dwilkins@cs.olemiss.edu
Journal: BMC Bioinformatics. 8 Suppl 7:S1
Publication Date: Friday, November 30, 2007
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Towards validating the hypothesis of phylogenetic profiling.
by Loganantharaj R, Atwi M.
Affliation: Bioinformatics Research Lab, The Center for Advanced Computer Studies, PO Box 44330, University of Louisiana, Lafayette, LA 70504, USA. logan@cacs.louisiana.edu
Journal: BMC Bioinformatics. 8 Suppl 7:S25
Publication Date: Friday, November 30, 2007
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Diagnosis of renal allograft subclinical rejection by urine protein fingerprint analysis.
by Mao Y, Yu J, Chen J, Yang H, He Q, Shou Z, Wu J, Zheng S.
Affliation: The Kidney Disease Center, the First Affiliated Hospital of Medical College, Zhejiang University, Hangzhou, China.
Journal: Transpl Immunol. 18(3):255-9
Publication Date: Friday, November 30, 2007
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Efficient composite pattern finding from monad patterns.
by Zhou J, Sander J, Lin G.
Affliation: Bioinformatics Research Group, Department of Computing Science, University of Alberta, Edmonton, Alberta T6G 2E8, Canada. jianjun@cs.ualberta.ca
Journal: Int J Bioinform Res Appl. 3(1):86-99
Publication Date: Friday, November 30, 2007
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Analysing the performance of personal computers based on Intel microprocessors for sequence aligning bioinformatics applications.
by Nair PS, John EB.
Affliation: Department of Electrical and Computer Engineering, University of Texas, San Antonio, TX 78249, USA. pradeep.nair@utsa.edu
Journal: Int J Bioinform Res Appl. 3(2):187-205
Publication Date: Friday, November 30, 2007
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An ontology-based framework for bioinformatics workflows.
by Digiampietri LA, Perez-Alcazar Jde J, Medeiros CB.
Affliation: Institute of Computing, University of Campinas, CP 6176, 13084-971, Campinas, SP, Brazil. luciano@ic.unicamp.br
Journal: Int J Bioinform Res Appl. 3(3):268-85
Publication Date: Friday, November 30, 2007
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The (my)Grid ontology: bioinformatics service discovery.
by Wolstencroft K, Alper P, Hull D, Wroe C, Lord PW, Stevens RD, Goble CA.
Affliation: The School of Computer Science, University of Manchester, Manchester, M13 9PL, UK. katherine.wolstencroft@manchester.ac.uk
Journal: Int J Bioinform Res Appl. 3(3):303-25
Publication Date: Friday, November 30, 2007
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Enhanced semantic access to the protein engineering literature using ontologies populated by text mining.
by Witte R, Kappler T, Baker CJ.
Affliation: Institute for Program Structures and Data Organization (IPD), Faculty of Informatics, Universitat Karlsruhe (TH), Germany. witte@ipd.uka.de
Journal: Int J Bioinform Res Appl. 3(3):389-413
Publication Date: Friday, November 30, 2007
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Prediction of both conserved and nonconserved microRNA targets in animals.
by Wang X, El Naqa IM.
Affliation: Department of Radiation Oncology, Washington University School of Medicine, St. Louis, MO 63110, USA.
Journal: Bioinformatics. :
Publication Date: Friday, November 30, 2007
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Mobius: An integrated discrete-event modeling environment.
by Peccoud J, Courtney T, Sanders WH.
Affliation: Virginia Bioinformatics Institute, Washington Street, MC0477, Blacksburg, VA 24061, USA.
Journal: Bioinformatics. :
Publication Date: Friday, November 30, 2007
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Identification of the dehydratase component of the mycobacterial mycolic acid-synthesizing fatty acid synthase-II complex.
by Brown AK, Bhatt A, Singh A, Saparia E, Evans AF, Besra GS.
Affliation: School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK.
Journal: Microbiology. 153(Pt 12):4166-73
Publication Date: Friday, November 30, 2007
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Evidence for the existence of a functional Kiss1/Kiss1 receptor pathway in fish.
by van Aerle R, Kille P, Lange A, Tyler CR.
Affliation: Environmental and Molecular Fish Biology, School of Biosciences, Hatherly Laboratories, University of Exeter, Devon EX4 4PS, UK.
Journal: Peptides. :
Publication Date: Thursday, November 29, 2007
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GRSDB2 and GRS_UTRdb: databases of quadruplex forming G-rich sequences in pre-mRNAs and mRNAs.
by Kikin O, Zappala Z, D'Antonio L, Bagga PS.
Affliation: Bergen County Academies, Hackensack and Bioinformatics, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ, USA.
Journal: Nucleic Acids Res. :
Publication Date: Thursday, November 29, 2007
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Modeling the adaptive immune system: predictions and simulations.
by Lundegaard C, Lund O, Kesmir C, Brunak S, Nielsen M.
Affliation: Center for biological sequence analysis, CBS, Kemitorvet 208, Technical University of Denmark, DK-2800 Lyngby, Denmark and Theoretical biology/bioinformatics, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Journal: Bioinformatics. :
Publication Date: Thursday, November 29, 2007
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[Comparison on molecular characteristics of human gamma D-crystallin protein and its five mutations]
by Liu Z, Wu M.
Affliation: State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou 510060, China.
Journal: Yan Ke Xue Bao. 23(3):129-35
Publication Date: Wednesday, November 28, 2007
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Diagnostic potential of serum protein pattern in Type 2 diabetic nephropathy.
by Yang YH, Zhang S, Cui JF, Lu B, Dong XH, Song XY, Liu YK, Zhu XX, Hu RM.
Affliation: Institute of Endocrinology and Diabetology, Department of Endocrinology, Huashan Hospital, Fudan University, Shanghai, China.
Journal: Diabet Med. 24(12):1386-92
Publication Date: Wednesday, November 28, 2007
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Applying genomics to organ transplantation medicine in both discovery and validation of biomarkers.
by Kurian S, Grigoryev Y, Head S, Campbell D, Mondala T, Salomon DR.
Affliation: Department of Molecular & Experimental Medicine, The Scripps Research Institute, La Jolla, California, 92037, United States.
Journal: Int Immunopharmacol. 7(14):1948-60
Publication Date: Tuesday, November 27, 2007
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