High-sensitivity analysis of specific peptides in complex samples by selected MS/MS ion monitoring and linear ion trap mass spectrometry: Application to biological studies.
by Jorge I, Casas EM, Villar M, Ortega-Pérez I, López-Ferrer D, Martínez-Ruiz A, Carrera M, Marina A, Martínez P, Serrano H, Cañas B, Were F, Gallardo JM, Lamas S, Redondo JM, García-Dorado D, Vázquez J.
Affliation: Protein Chemistry and Proteomics Laboratory, Centro de Biología Molecular Severo Ochoa, CSIC, Madrid, Spain.
Journal: J Mass Spectrom. 42(11):1391-1403
Publication Date: Thursday, October 25, 2007
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Using systems biology to define the essential biological networks responsible for adaptation to endurance exercise training.
by Keller P, Vollaard N, Babraj J, Ball D, Sewell DA, Timmons JA.
Affliation: School of Life Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
Journal: Biochem Soc Trans. 35(Pt 5):1306-9
Publication Date: Wednesday, October 24, 2007
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Dissecting DISC1 function through protein-protein interactions.
by Brandon NJ.
Affliation: Schizophrenia and Bipolar Research, Wyeth Discovery Neuroscience, CN8000, Princeton, NJ 08543, U.S.A.
Journal: Biochem Soc Trans. 35(Pt 5):1283-6
Publication Date: Wednesday, October 24, 2007
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Elk-1 is a novel protein-binding partner for FAK, regulating phagocytosis in medfly hemocytes.
by Mamali I, Kapodistria K, Lampropoulou M, Marmaras VJ.
Affliation: Department of Biology, University of Patras, 26500 Patras, Greece.
Journal: J Cell Biochem. :
Publication Date: Tuesday, October 23, 2007
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Bioinformatics tools enabling u-statistics for microarrays.
by Wittkowski KM, Haider A, Sehayek E, Suarez-Farinas M, Pellegrino M, Peshansky A, Coffran C, Coker S.
Affliation: Gen. Clinical Res. Center, Rockefeller Univ. Hosp., New York, NY.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:3464-9
Publication Date: Tuesday, October 23, 2007
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E. coli Promoter Prediction Using Feed-Forward Neural Networks.
by Zhang F, Kuo MD, Brunkhors A.
Affliation: Dept. of Radiol., California Univ., San Diego, CA.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:2025-7
Publication Date: Tuesday, October 23, 2007
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Prediction of RNA-Binding Residues in Protein Sequences Using Support Vector Machines.
by Wang L, Brown SJ.
Affliation: Div. of Biol., Kansas State Univ., Manhattan, KS.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:5830-3
Publication Date: Tuesday, October 23, 2007
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Linear discrimination of transmembrane from non-transmembrane segments in proteins using higher-order crossings.
by Kitsas IK, Panas SM, Hadjileontiadis LJ.
Affliation: Dept. of Electr. & Comput. Eng., Aristotle Univ. of Thessaloniki.
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:5818-21
Publication Date: Tuesday, October 23, 2007
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Cell system perturbation for time-resolved quantification of tyrosine phosphorylation in complex samples.
by White FM.
Affliation:
Journal: Conf Proc IEEE Eng Med Biol Soc. 1:51-2
Publication Date: Tuesday, October 23, 2007
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Selecting differentially expressed genes using minimum probability of classification error.
by Mahata P, Mahata K.
Affliation: School of Electrical Engineering and Computer Science, The University of Newcastle, Callaghan, NSW 2308, Australia.
Journal: J Biomed Inform. :
Publication Date: Monday, October 22, 2007
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Perpetuation of immunological memory through common MHC-I binding modes of peptidomimic and antigenic peptides.
by Gangadhar V, Jeyakani JJ, Shaila MS, Nayak R, Chandra N.
Affliation: Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Journal: Biochem Biophys Res Commun. :
Publication Date: Monday, October 22, 2007
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Identifying potential immunodominant positions and predicting antigenic variants of influenza A/H3N2 viruses.
by Lee MS, Chen MC, Liao YC, Hsiung CA.
Affliation: Vaccine R&D Center, National Health Research Institutes, Zhunan, Taiwan.
Journal: Vaccine. :
Publication Date: Monday, October 22, 2007
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miRNA: The New Gene Silencer.
by Ross JS, Carlson JA, Brock G.
Affliation: Department of Pathology and Laboratory Medicine, Albany Medical College.
Journal: Am J Clin Pathol. 128(5):830-6
Publication Date: Monday, October 22, 2007
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RESP18, a homolog of the luminal domain IA-2, is found in dense core vesicles in pancreatic islet cells and is induced by high glucose.
by Zhang G, Hirai H, Cai T, Miura J, Yu P, Huang H, Schiller MR, Swaim WD, Leapman RD, Notkins AL.
Affliation: Experimental Medicine Section, Oral Infection and Immunity Branch (OIIB), National Institute of Dental and Craniofacial Research (NIDCR), The National Institutes of Health (NIH), Bethesda, Maryland 20892, USA.
Journal: J Endocrinol. 195(2):313-21
Publication Date: Monday, October 22, 2007
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Using directed information to build biologically relevant influence.
by Rao A, Hero AO, States DJ, Engel JD.
Affliation: Electrical Engineering and Computer Science, Bioinformatics, University of Michigan, Ann Arbor, MI 48109, USA. ukarvind@umich.edu.
Journal: Comput Syst Bioinformatics Conf. 6:145-56
Publication Date: Monday, October 22, 2007
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Rule-based human gene normalization in biomedical text with confidence estimation.
by Lau WW, Johnson CA, Becker KG.
Affliation: Center for Information Technology, National Institutes of Health, Bethesda, MD 20892-5624, USA. johnson@mail.nih.gov.
Journal: Comput Syst Bioinformatics Conf. 6:371-9
Publication Date: Monday, October 22, 2007
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Array CGH and gene-expression profiling reveals distinct genomic instability patterns associated with DNA repair and cell-cycle checkpoint pathways in Ewing's sarcoma.
by Ferreira BI, Alonso J, Carrillo J, Acquadro F, Largo C, Suela J, Teixeira MR, Cerveira N, Molares A, Goméz-López G, Pestaña A, Sastre A, Garcia-Miguel P, Cigudosa JC.
Affliation: 1Molecular Cytogenetics Group, Centro Nacional de Investigaciones Oncológicas (CNIO), and CIBER on Rare Diseases (CIBERER), Madrid, Spain.
Journal: Oncogene. :
Publication Date: Monday, October 22, 2007
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Supercomputing with Toys: Harnessing the Power of NVIDIA 8800GTX and Playstation 3 for Bioinformatics Problem.
by Wilson J, Dai M, Jakupovic E, Watson S, Meng F.
Affliation: Molecular and Behavioral Neuroscience Institute and Department of Psychiatry, University of Michigan, Ann Arbor, MI 48109, USA. mengf@umich.edu.
Journal: Comput Syst Bioinformatics Conf. 6:387-90
Publication Date: Monday, October 22, 2007
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Exact and Heuristic Algorithms for Weighted Cluster Editing.
by Rahmann S, Wittkop T, Baumbach J, Martin M, Truß A, Böcker S.
Affliation: Computational Methods for Emerging Technologies group, Genome Informatics, Technische Fakultät, Bielefeld University, D-33594 Bielefeld, Germany. Sven.Rahmann@cebitec.uni-bielefeld.de.
Journal: Comput Syst Bioinformatics Conf. 6(1):391-401
Publication Date: Monday, October 22, 2007
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Chemical genomics: a challenge for de novo drug design.
by Dean PM.
Affliation: De Novo Pharmaceuticals Ltd, Vision Park, Compass House, Histon, Cambridge, CB4 9ZR, UK, philip.dean@denovopharma.com.
Journal: Mol Biotechnol. 37(3):237-45
Publication Date: Monday, October 22, 2007
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