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Bioinformatics Journals and Computational Biology Journals


Bioinformatics Journals and Computational Biology Journals - September, 2007

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A genome-wide analysis in Anopheles gambiae mosquitoes reveals 46 male accessory gland genes, possible modulators of female behavior.
by Dottorini T, Nicolaides L, Ranson H, Rogers DW, Crisanti A, Catteruccia F.
Affliation: Dipartimento di Medicina Sperimentale e Scienze Biochimiche, Università degli Studi di Perugia, Via Del Giochetto, 06122 Perugia, Italy.
Journal: Proc Natl Acad Sci U S A. :
Publication Date: Friday, September 28, 2007
PubMed citation

The Presence of Antibodies Recognizing a Peptide Derived from the Second Conserved Region of HIV-1 gp120 Correlates with Non-Progressive HIV Infection.
by Djordjevic A, Veljkovic M, Antoni S, Sakarellos-Daitsiotis M, Krikorian D, Zevgiti S, Dietrich U, Veljkovic N, Branch DR.
Affliation: Centre for Multidisciplinary Research, Institute of Nuclear Sciences VINCA, Belgrade, Serbia. nevenav@vin.bg.ac.yu.
Journal: Curr HIV Res. 5(5):443-8
Publication Date: Thursday, September 27, 2007
PubMed citation

In-silico nanobio-design. A new frontier in computational biology.
by Cachau RE, Gonzalez-Nilo FD, Ventura ON, Fritts MJ.
Affliation: ABCC, SAIC-Frederick, Inc., National Cancer Institute at Frederick, Frederick, MD, USA. cachau@ncifcrf.gov.
Journal: Curr Top Med Chem. 7(15):1537-40
Publication Date: Thursday, September 27, 2007
PubMed citation

Scanning the Genome of Mycobacterium tuberculosis to Identify Potential Lectins.
by Singh DD, Chandran D, Jeyakani J, Chandra N.
Affliation: Bioinformatics Centre & Supercomputer Education and Research Centre, Indian Institute of Science, Bangalore: 560 012, India. nchandra@serc.iisc.ernet.in.
Journal: Protein Pept Lett. 14(7):683-91
Publication Date: Thursday, September 27, 2007
PubMed citation

Comparative study of the hemagglutinin and neuraminidase genes of influenza A virus H3N2, H9N2, and H5N1 subtypes using bioinformatics techniques.
by Ahn I, Son HS.
Affliation: Bioinformatics Team, Supercomputing Center, Korea Institute of Science and Technology Information, P.O. Box 122, Yusong-Gu, Daejon 305-806, Korea.
Journal: Can J Microbiol. 53(7):830-9
Publication Date: Thursday, September 27, 2007
PubMed citation

[Sequence analysis for genes encoding nucleoprotein and envelope protein of a new human coronavirus NL63 identified from a pediatric patient in Beijing by bioinformatics]
by Xing JF, Zhu RN, Qian Y, Zhao LQ, Deng J, Wang F, Sun Y.
Affliation: Laboratory of Virology, Capital Institute of Pediatrics, Beijing 100020, China.
Journal: Bing Du Xue Bao. 23(4):245-51
Publication Date: Wednesday, September 26, 2007
PubMed citation

Bioinformatics as tool to identify gene/protein-pathways associated with nonalcoholic fatty liver disease/nonalcoholic steatohepatitis.
by Alisi A, Marcellini M, Nobili V.
Affliation: Liver Unit, Bambino Gesù Children's Hospital and Research Institute, Rome, Italy.
Journal: Hepatology. 46(4):1306
Publication Date: Wednesday, September 26, 2007
PubMed citation

Protein secondary structure analyses from circular dichroism spectroscopy: Methods and reference databases.
by Whitmore L, Wallace BA.
Affliation: Dept. of Crystallography, Birkbeck College, Univ. of London, London WC1E 7HX, UK.
Journal: Biopolymers. :
Publication Date: Wednesday, September 26, 2007
PubMed citation

A Bioinformatics Approach to Identifying Tail-anchored Proteins in the Human Genome.
by Kalbfleisch T, Cambon A, Wattenberg BW.
Affliation: Department of Biochemistry and Molecular Biology, University of Louisville School of Medicine, Louisville, KY, USA.
Journal: Traffic. :
Publication Date: Tuesday, September 25, 2007
PubMed citation

The 26S proteasome in Schistosoma mansoni: Bioinformatics analysis, developmental expression, and RNA interference (RNAi) studies.
by Nabhan JF, El-Shehabi F, Patocka N, Ribeiro P.
Affliation: Institute of Parasitology, McGill University, Macdonald Campus, 21,111 Lakeshore Road, Sainte Anne de Bellevue, Que., Canada H9X 3V9.
Journal: Exp Parasitol. :
Publication Date: Tuesday, September 25, 2007
PubMed citation

Efficient parameter estimation for spatio-temporal models of pattern formation: Case study of Drosophila melanogaster.
by Nanfack YF, Kaandorp JA, Blom J.
Affliation: Universiteit van Amsterdam, Kruislaan 403, 1098 SJ Amsterdam, the Netherlands.
Journal: Bioinformatics. :
Publication Date: Tuesday, September 25, 2007
PubMed citation



Molecular allelokaryotyping of pediatric acute lymphoblastic leukemias by high resolution single nucleotide polymorphism oligonucleotide genomic microarray.
by Kawamata N, Ogawa S, Zimmermann M, Kato M, Sanada M, Hemminki K, Yamatomo G, Nannya Y, Koehler R, Flohr T, Miller CW, Harbott J, Ludwig WD, Stanulla M, Schrappe M, Bartram CR, Koeffler HP.
Affliation: Hematology/Oncology, Cedars-Sinai Medical Center/UCLA School of Medicine, Los Angeles, CA, United States.
Journal: Blood. :
Publication Date: Monday, September 24, 2007
PubMed citation

Functional architecture of the retromer cargo-recognition complex.
by Hierro A, Rojas AL, Rojas R, Murthy N, Effantin G, Kajava AV, Steven AC, Bonifacino JS, Hurley JH.
Affliation: [1] Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, [2] These authors contributed equally to this work.
Journal: Nature. :
Publication Date: Monday, September 24, 2007
PubMed citation

Widespread deregulation of microRNA expression in human prostate cancer.
by Ozen M, Creighton CJ, Ozdemir M, Ittmann M.
Affliation: [1] 1Department of Pathology, Baylor College of Medicine, Houston, TX, USA [2] 2Michael E DeBakey Department of Veterans Affairs Medical Center, Houston, TX, USA.
Journal: Oncogene. :
Publication Date: Monday, September 24, 2007
PubMed citation

Genome wide co-expression among the starch debranching enzyme genes AtISA1, AtISA2, and AtISA3 in Arabidopsis thaliana.
by Li L, Ilarslan H, James MG, Myers AM, Wurtele ES.
Affliation: Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011, USA.
Journal: J Exp Bot. :
Publication Date: Monday, September 24, 2007
PubMed citation

An evolving method for learning HMM Structure: prediction of protein secondary structure.
by Won KJ, Hamelryck T, Prugel-Bennett A, Krogh A.
Affliation:
Journal: BMC Bioinformatics. 8(1):357
Publication Date: Monday, September 24, 2007
PubMed citation

Unravelling the hidden heterogeneities of diffuse large B-cell lymphoma based on coupled two-way clustering.
by Zhang W, Li L, Li X, Jiang W, Huo J, Wang Y, Lin M, Rao S.
Affliation:
Journal: BMC Genomics. 8(1):332
Publication Date: Monday, September 24, 2007
PubMed citation

Multi-scale computational modelling in biology and physiology.
by Southern J, Pitt-Francis J, Whiteley J, Stokeley D, Kobashi H, Nobes R, Kadooka Y, Gavaghan D.
Affliation: Fujitsu Laboratories of Europe Ltd, Hayes Park Central, Hayes End Road, Hayes, Middlesex UB4 8FE, UK.
Journal: Prog Biophys Mol Biol. :
Publication Date: Monday, September 24, 2007
PubMed citation

Functional characterization of the gene PA2384 in large-scale gene regulation in response to iron starvation in Pseudomonas aeruginosa.
by Zheng P, Sun J, Geffers R, Zeng AP.
Affliation: Systems Biology, Helmholtz Centre for Infection Research, Inhoffenstrasse 7, D-38124 Braunschweig, Germany.
Journal: J Biotechnol. :
Publication Date: Monday, September 24, 2007
PubMed citation

Structural analysis of SNARE motifs from sea perch, Lateolabrax japonicus by computerized approaches.
by Chen K, Huang X.
Affliation: Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; The First Institute of Oceanography, State Oceanic Administration, Qingdao 266061, China; Graduate University, Chinese Academy of Sciences, Beijing 100039, China.
Journal: Comput Biol Chem. :
Publication Date: Monday, September 24, 2007
PubMed citation

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