Conceptual-level workflow modeling of scientific experiments using NMR as a case study.
by Verdi KK, Ellis HJ, Gryk MR.
Affliation:
Journal: BMC Bioinformatics. 8(1):31
Publication Date: Wednesday, January 31, 2007
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Identification of FAKTS as a novel 14-3-3-associated nuclear protein.
by Luhn P, Wang H, Marcus AI, Fu H.
Affliation: Program of Biochemistry, Cell, and Developmental Biology, Graduate Division of Biological and Biomedical Sciences, Emory University School of Medicine, Atlanta, GA 30322.
Journal: Proteins. :
Publication Date: Tuesday, January 30, 2007
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Bioinformatics and experimental derivation of an efficient hybrid 3' untranslated region and use in expression active linear DNA with minimum poly(A) region.
by Al-Zoghaibi F, Ashour T, Al-Ahmadi W, Abulleef H, Demirkaya O, Khabar KS.
Affliation: Program in BioMolecular Research, King Faisal Specialist Hospital and Research Center, Riyadh 11211, Saudi Arabia.
Journal: Gene. :
Publication Date: Monday, January 29, 2007
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Experimental determination of translational starts using peptide mass mapping and tandem mass spectrometry within the proteome of Mycobacterium tuberculosis.
by Rison SC, Mattow J, Jungblut PR, Stoker NG.
Affliation: The Royal Veterinary College, Royal College Street, London NW1 0TU, UK.
Journal: Microbiology. 153(Pt 2):521-8
Publication Date: Monday, January 29, 2007
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A Chemical Approach to the Identification of Tensin-Binding Proteins.
by Wavreille AS, Pei D.
Affliation: pei.3@osu.edu.
Journal: ACS Chem Biol. :
Publication Date: Monday, January 29, 2007
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Trends in life science grid: from computing grid to knowledge grid.
by Konagaya A.
Affliation: Genomic Sciences Center, RIKEN, Yokohama, Japan. konagaya@gsc.riken.jp.
Journal: BMC Bioinformatics. 7 Suppl 5:S10
Publication Date: Friday, January 26, 2007
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Curation of viral genomes: challenges, applications and the way forward.
by Kulkarni-Kale U, Bhosle SG, Manjari GS, Joshi M, Bansode S, Kolaskar AS.
Affliation: Bioinformatics Centre, University of Pune, Pune 411 007 India. urmila@bioinfo.ernet.in.
Journal: BMC Bioinformatics. 7 Suppl 5:S12
Publication Date: Friday, January 26, 2007
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Splice site identification using probabilistic parameters and SVM classification.
by Baten A, Chang B, Halgamuge S, Li J.
Affliation: Dynamic Systems and Control Research Group, DoMME, The University of Melbourne, Victoria 3010, Australia. a.baten@pgrad.unimelb.edu.au.
Journal: BMC Bioinformatics. 7 Suppl 5:S15
Publication Date: Friday, January 26, 2007
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Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus.
by Khan AM, Heiny A, Lee KX, Srinivasan K, Tan TW, August JT, Brusic V.
Affliation: The Division of Biomedical Sciences, Johns Hopkins Singapore, 31 Biopolis Way, #02-01 The Nanos, Singapore 138669, Singapore. g0501159@nus.edu.sg.
Journal: BMC Bioinformatics. 7 Suppl 5:S4
Publication Date: Friday, January 26, 2007
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Motif kernel generated by genetic programming improves remote homology and fold detection.
by Haandstad T, Hestnes AJ, Saetrom P.
Affliation:
Journal: BMC Bioinformatics. 8(1):23
Publication Date: Friday, January 26, 2007
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Benchmarking natural-language parsers for biological applications using dependency graphs.
by Clegg AB, Shepherd AJ.
Affliation:
Journal: BMC Bioinformatics. 8(1):24
Publication Date: Friday, January 26, 2007
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Bias in random forest variable importance measures: Illustrations, sources and a solution.
by Strobl C, Boulesteix AL, Zeileis A, Hothorn T.
Affliation:
Journal: BMC Bioinformatics. 8(1):25
Publication Date: Friday, January 26, 2007
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The Western Australian Twin Register: a population-based register of adult and child multiples.
by Lee JD, Palmer LJ.
Affliation: Laboratory for Genetic Epidemiology, Western Australian Institute for Medical Research, Perth, Western Australia, Australia. jdlee@cyllene.uwa.edu.au
Journal: Twin Res Hum Genet. 9(6):712-7
Publication Date: Friday, January 26, 2007
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CTL epitopes for influenza A including the H5N1 bird flu; genome-, pathogen-, and HLA-wide screening.
by Wang M, Lamberth K, Harndahl M, Røder G, Stryhn A, Larsen MV, Nielsen M, Lundegaard C, Tang ST, Dziegiel MH, Rosenkvist J, Pedersen AE, Buus S, Claesson MH, Lund O.
Affliation: Laboratory of Cellular Immunology, Department of Medical Anatomy, The Panum Institute, University of Copenhagen, Blegdamsvej 3, 2200 Copenhagen N, Denmark.
Journal: Vaccine. :
Publication Date: Friday, January 26, 2007
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Establishing bioinformatics research in the Asia Pacific.
by Ranganathan S, Tammi M, Gribskov M, Tan TW.
Affliation: Department of Chemistry and Biomolecular Sciences and Biotechnology Research Institute, Macquarie University, Sydney NSW 2109, Australia. shoba@els.mq.edu.au.
Journal: BMC Bioinformatics. 7 Suppl 5:S1
Publication Date: Friday, January 26, 2007
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A shifted repertoire of endocannabinoid genes in the zebrafish (Danio rerio).
by McPartland JM, Glass M, Matias I, Norris RW, Kilpatrick CW.
Affliation: GW Pharmaceuticals, 53 Washington Street Ext., Middlebury, VT, 05753, USA, mcpruitt@verizon.net.
Journal: Mol Genet Genomics. :
Publication Date: Friday, January 26, 2007
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Finding a T-cell epitope for a melanoma vaccine by an immunomics technique.
by Wiwanitkit V.
Affliation: Department of Laboratory Medicine, Faculty of Medicine, Chulalongkorn University, Bangkok Thailand 10330. wviroj@yahoo.com.
Journal: Asian Pac J Cancer Prev. 2006 Oct-Dec;7(4):659-60
Publication Date: Thursday, January 25, 2007
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The protease allergen Der p 1 cleaves cell surface DC-SIGN and DC-SIGNR: experimental analysis of in silico substrate identification and implications in allergic responses.
by Furmonaviciene R, Ghaemmaghami AM, Boyd SE, Jones NS, Bailey K, Willis AC, Sewell HF, Mitchell DA, Shakib F.
Affliation: Institute of Infection, Immunity and Inflammation, School of Molecular Medical Sciences, University of Nottingham, Nottingham, UK.
Journal: Clin Exp Allergy. 37(2):231-42
Publication Date: Thursday, January 25, 2007
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The digital language of amino acids.
by Kuric L.
Affliation: Economic Faculty, Sarajevo, University of Bosnia and Herzegovina, Novi Travnik, Herzegovina.
Journal: Amino Acids. :
Publication Date: Thursday, January 25, 2007
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Prediction of DNA-binding residues from sequence features.
by Wang L, Brown SJ.
Affliation: Bioinformatics Center, Division of Biology, Kansas State University Manhattan, Kansas 66506, USA. ljwang@ksu.edu.
Journal: J Bioinform Comput Biol. 4(6):1141-58
Publication Date: Wednesday, January 24, 2007
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