A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB.
by Rayner TF, Rocca-Serra P, Spellman PT, Causton HC, Farne A, Holloway E, Irizarry RA, Liu J, Maier DS, Miller M, Petersen K, Quackenbush J, Sherlock G, Stoeckert CJ, White J, Whetzel PL, Wymore F, Parkinson H, Sarkans U, Ball CA, Brazma A.
Affliation:
Journal: BMC Bioinformatics. 7(1):489
Publication Date: Tuesday, November 07, 2006
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XML schemas for common bioinformatic data types and their application in workflow systems.
by Seibel PN, Kruger J, Hartmeier S, Schwarzer K, Lowenthal K, Mersch H, Dandekar T, Giegerich R.
Affliation:
Journal: BMC Bioinformatics. 7(1):490
Publication Date: Tuesday, November 07, 2006
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GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima.
by Shida K.
Affliation:
Journal: BMC Bioinformatics. 7(1):486
Publication Date: Monday, November 06, 2006
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The evolution of putative starch-binding domains.
by Machovic M, Janecek S.
Affliation: Institute of Molecular Biology, Slovak Academy of Sciences, Dúbravská Cesta 21, SK-84551 Bratislava, Slovakia.
Journal: FEBS Lett. :
Publication Date: Monday, November 06, 2006
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A qualitative study of the implementation of a bioinformatics tool in a biological research laboratory.
by Anderson NR, Ash JS, Tarczy-Hornoch P.
Affliation: Department of Biomedical and Health Informatics, University of Washington, P.O. Box 357240, Seattle, WA 98195-7240, United States.
Journal: Int J Med Inform. :
Publication Date: Monday, November 06, 2006
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Identification of two novel quantitative trait loci for pre-eclampsia susceptibility on chromosomes 5q and 13q using a variance components-based linkage approach.
by Johnson MP, Fitzpatrick E, Dyer TD, Jowett JB, Brennecke SP, Blangero J, Moses EK.
Affliation: Department of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX, USA.
Journal: Mol Hum Reprod. :
Publication Date: Monday, November 06, 2006
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Guest Editor's Introduction to the Special Issue on Computational Biology and Bioinformatics -- Part 1.
by Casadio R.
Affliation:
Journal: IEEE/ACM Trans Comput Biol Bioinform. 2006 Oct-Dec;3(4):321-2
Publication Date: Monday, November 06, 2006
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Efficient detection of network motifs.
by Wernicke S.
Affliation:
Journal: IEEE/ACM Trans Comput Biol Bioinform. 2006 Oct-Dec;3(4):347-59
Publication Date: Monday, November 06, 2006
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[Cloning of genes transactivated by nonstructural protein 4A of hepatitis C virus.]
by Liu Y, Bai GQ, Cheng J, Yang Q, Zhang LY, Ji D, Wang JJ.
Affliation: Viral Hepatitis Research Center, Institute of Infectious Diseases, The No.302 Hospital of PLA, Beijing 100039, China.
Journal: Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi. 20(3):270-2
Publication Date: Monday, November 06, 2006
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[Screening and cloning of the down-regulation gene by recombinant interferon-B using suppression subtractive hybridization technique.]
by Zhong YW, Cheng J, Qu JH, Zhang LY, Guo J, Li XD, Xu DP.
Affliation: Viral Hepatitis Research Center, Institute of Infectious Diseases, The No.302 Hospital of The People's Liberation Army, Beijing 100039, China. Corresponding author: ZHONG Yan-wei, E-mail: zhongyanwei@126.com, Tel: 010-66933392.
Journal: Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi. 20(3):273-5
Publication Date: Monday, November 06, 2006
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Mapping antigenic diversity and strain specificity of mumps virus: A bioinformatics approach.
by Kulkarni-Kale U, Ojha J, Manjari GS, Deobagkar DD, Mallya AD, Dhere RM, Kapre SV.
Affliation: Bioinformatics Centre, University of Pune, Pune 411007, India.
Journal: Virology. :
Publication Date: Friday, November 03, 2006
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A comparative study of cells in inflammation, EAE and MS using biomedical literature data mining.
by Palakal M, Bright J, Sebastian T, Hartanto S.
Affliation: Department of Computer and Information Science, Indiana University-Purdue University Indianapolis, 723 W. Michigan St. SL 280, Indianapolis, IN, 46202, USA, mpalakal@cs.iupui.edu.
Journal: J Biomed Sci. :
Publication Date: Friday, November 03, 2006
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Smashing peacocks further: drawing quasi-trees from biconnected components.
by Archambault D, Munzner T, Auber D.
Affliation: University of British Columbia. archam@cs.ubc.ca
Journal: IEEE Trans Vis Comput Graph. 2006 Sep-Oct;12(5):813-20
Publication Date: Friday, November 03, 2006
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A statistical score for assessing the quality of multiple sequence alignments.
by Ahola V, Aittokallio T, Vihinen M, Uusipaikka E.
Affliation:
Journal: BMC Bioinformatics. 7(1):484
Publication Date: Friday, November 03, 2006
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Introduction of G1 phase arrest in Human Hepatocellular carcinoma cells (HHCC) by APMCF1 gene transfection through the down-regulation of TIMP3 and up-regulation of the CDK inhibitors p21.
by Li Q, Yan W, Cheng S, Guo S, Wang W, Zhang Z, Wang L, Zhang J, Wang W.
Affliation: Department of Pathology, State Key Laboratory of GI Cancer Biology, Xijing Hospital, Fourth Military Medical University, Xi’an, 710032, Shaanxi Province, China, yan070@sohu.com.
Journal: Mol Biol Rep. :
Publication Date: Thursday, November 02, 2006
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A relational database for management of flow cytometry and ELISpot clinical trial data.
by Cavenaugh JS, Snell P, Jeffries D, Waight PA, McConkey SJ.
Affliation: Nuffield Department of Clinical Medicine, John Radcliffe Hospital, University of Oxford, Oxford, UK.
Journal: Cytometry B Clin Cytom. :
Publication Date: Thursday, November 02, 2006
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Biochemical, molecular characterization, and glycoproteomic analyses of alpha(1)-proteinase inhibitor products used for replacement therapy*.
by Kolarich D, Turecek PL, Weber A, Mitterer A, Graninger M, Matthiessen P, Nicolaes GA, Altmann F, Schwarz HP.
Affliation: University of Natural Resources and Applied Life Sciences, Vienna, Austria.
Journal: Transfusion. 46(11):1959-77
Publication Date: Wednesday, November 01, 2006
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Methods and protocols for prediction of immunogenic epitopes.
by Tong JC, Tan TW, Ranganathan S.
Affliation:
Journal: Brief Bioinform. :
Publication Date: Wednesday, November 01, 2006
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Enrichment analysis in high-throughput genomics--accounting for dependency in the NULL.
by Gold DL, Coombes KR, Wang J, Mallick B.
Affliation:
Journal: Brief Bioinform. :
Publication Date: Wednesday, November 01, 2006
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