Self-organizing neural networks to support the discovery of DNA-binding motifs.
by Mahony S, Benos PV, Smith TJ, Golden A.
Affliation: Department of Computational Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA; Department of Computer Science, University of Pittsburgh, Pittsburgh, PA, USA.
Journal: Neural Netw. :
Publication Date: Friday, July 14, 2006
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EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences.
by Hu J, Yang YD, Kihara D.
Affliation:
Journal: BMC Bioinformatics. 7(1):342
Publication Date: Friday, July 14, 2006
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Comparison of transcripts in Phalaenopsis bellina and Phalaenopsis equestris (Orchidaceae) flowers to deduce the monoterpene biosynthesis pathway.
by Hsiao YY, Tsai WC, Kuoh CS, Huang TH, Wang HC, Leu YL, Wu TS, Chen WH, Chen HH.
Affliation:
Journal: BMC Plant Biol. 6(1):14
Publication Date: Thursday, July 13, 2006
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Remote homology detection based on oligomer distances.
by Lingner T, Meinicke P.
Affliation: Abteilung Bioinformatik, Institut für Mikrobiologie und Genetik, Georg-August-Universität Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany.
Journal: Bioinformatics. :
Publication Date: Thursday, July 13, 2006
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RBR: library-less repeat detection for ESTs.
by Malde K, Schneeberger K, Coward E, Jonassen I.
Affliation: Computational Biology Unit, Bergen Centre for Computational Sciences, University of Bergen.
Journal: Bioinformatics. :
Publication Date: Thursday, July 13, 2006
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Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands.
by Vernikos GS, Parkhill J.
Affliation: The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
Journal: Bioinformatics. :
Publication Date: Thursday, July 13, 2006
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Research actuality in the genetics of stroke.
by Orlacchio A, Bernardi G.
Affliation: Laboratorio di Neurogenetica, I.R.C.C.S. Santa Lucia, Rome, Italy. a.orlacchio@hsantalucia.it
Journal: Clin Exp Hypertens. 2006 Apr-May;28(3-4):191-7
Publication Date: Wednesday, July 12, 2006
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[Screening and Analysis of Coding SNPs of HLA-DQA1 Gene Involved in Susceptibility for Cervical Cancer.]
by Li YY, Xing J, Zhao LS, Li YN, Wang YC, Zhang WM.
Affliation: Laboratory of Molecular Biology, Basic Medical Research Center, Tianjin Medical University, Tianjin 300070, P. R. China. yanyun_li@yeah.net.
Journal: Ai Zheng. 25(7):906-10
Publication Date: Tuesday, July 11, 2006
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DNA microarray technology in toxicogenomics of aquatic models: Methods and applications.
by Ju Z, Wells MC, Walter RB.
Affliation: Molecular Biosciences Research Group, Department of Chemistry and Biochemistry, 419 Centennial Hall, Texas State University, 601 University Drive, San Marcos, TX 78666, USA.
Journal: Comp Biochem Physiol C Toxicol Pharmacol. :
Publication Date: Monday, July 10, 2006
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Targeted anticancer immunotoxins and cytotoxic agents with direct killing moieties.
by Kawakami K, Nakajima O, Morishita R, Nagai R.
Affliation: Department of Pharmacoepidemiology, Graduate School of Medicine and Public Health, Kyoto University, Yoshida Konoecho, Sakyoku, Kyoto 606-8501, Japan. kawakami-k@umin.ac.jp
Journal: ScientificWorldJournal. 6:781-90
Publication Date: Monday, July 10, 2006
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Mass Spectrometric Identification of Proteins in Complex Post-Genomic Projects. Soluble Proteins of the Metabolically Versatile, Denitrifying 'Aromatoleum' Sp. Strain EbN1.
by Hufnagel P, Rabus R.
Affliation: Bruker Daltonik GmbH, Bremen, Germany.
Journal: J Mol Microbiol Biotechnol. 11(1-2):53-81
Publication Date: Friday, July 07, 2006
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Solution structures of the putative anti-sigma-factor antagonist TM1442 from Thermotoga maritima in the free and phosphorylated states.
by Etezady-Esfarjani T, Placzek WJ, Herrmann T, Wüthrich K.
Affliation: The Scripps Research Institute, Department of Molecular Biology and Joint Center for Structural Genomics, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Journal: Magn Reson Chem. 44(S1):61-70
Publication Date: Friday, July 07, 2006
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Neisseria gonorrhoeae type IV PILI undergo multisite, hierarchical modifications with phosphoethanolamine and phosphocholine requiring an enzyme structurally related to LPS phosphoethanolamine transferases.
by Aas FE, Egge-Jacobsen W, Winther-Larsen HC, Løvold C, Hitchen PG, Dell A, Koomey M.
Affliation: Molecular Biosciences, Univ. of Oslo, Oslo N-0316.
Journal: J Biol Chem. :
Publication Date: Friday, July 07, 2006
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Progress in biomarker discovery for diagnostic testing in epithelial ovarian cancer.
by Gogoi R, Srinivasan S, Fishman DA.
Affliation: New York University School of Medicine, 550 First Avenue, TH538, NY 10016, USA. radhika.gogoi@med.nyu.edu
Journal: Expert Rev Mol Diagn. 6(4):627-37
Publication Date: Friday, July 07, 2006
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AMDA: an R package for the automated microarray data analysis.
by Pelizzola M, Pavelka N, Foti M, Ricciardi-Castagnoli P.
Affliation:
Journal: BMC Bioinformatics. 7(1):335
Publication Date: Friday, July 07, 2006
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Constructing a semantically enriched biomedical service space: a paradigm with bioinformatics resources.
by Koutkias V, Malousi A, Chouvarda I, Maglaveras N.
Affliation: Lab. of Medical Informatics, Aristotle University of Thessaloniki, Greece.
Journal: Stud Health Technol Inform. 120:236-46
Publication Date: Thursday, July 06, 2006
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Database integration for predisposition genes discovery.
by Colonna FM, Sam Y, Boucelma O.
Affliation: LSIS, UMR 6168, Université Paul Cézanne Aix-Marseille 3.
Journal: Stud Health Technol Inform. 120:368-73
Publication Date: Thursday, July 06, 2006
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High Performance GRID Based Implementation for Genomics and Protein Analysis.
by Milanesi L, Merelli I.
Affliation: CNR-ITB Institute of Biomedical Technologies CNR, Via Fratelli Cervi n. 93 20090 Segrate (MILANO) Italy.
Journal: Stud Health Technol Inform. 120:374-80
Publication Date: Thursday, July 06, 2006
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On the Ancestral Compatibility of Two Phylogenetic Trees with Nested Taxa.
by Llabrés M, Rocha J, Rosselló F, Valiente G.
Affliation: Department of Mathematics and Computer Science, Research Institute of Health Science, University of the Balearic Islands, 07122, Palma de Mallorca, Spain.
Journal: J Math Biol. :
Publication Date: Thursday, July 06, 2006
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Keynote address: the role of algorithmic research in computational genomics.
by Karp RM.
Affliation: University of California at Berkeley and International Computer Science Institute, USA.
Journal: Proc IEEE Comput Soc Bioinform Conf. 2:10-1
Publication Date: Thursday, July 06, 2006
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