Integrating protein structures and precomputed genealogies in the Magnum database: Examples with cellular retinoid binding proteins.
by Bradley ME, Benner SA.
Affliation:
Journal: BMC Bioinformatics. 7(1):89
Publication Date: Tuesday, February 28, 2006
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Computational and experimental analysis identifies Arabidopsis genes specifically expressed during early seed development.
by Becerra C, Puigdomenech P, Vicient CM.
Affliation:
Journal: BMC Genomics. 7(1):38
Publication Date: Tuesday, February 28, 2006
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Overview and perspectives the transcriptome of Paracoccidioides brasiliensis.
by Andrade RV, Da Silva SP, Torres FA, Poças-Fonseca MJ, Silva-Pereira I, Maranhão AQ, Campos EG, Moraes LM, Jesuíno RS, Pereira M, Soares CM, Walter ME, Carvalho MJ, Almeida NF, Brigido MM, Felipe MS.
Affliation: Laboratorio de Biologia Molecular, Departamento de Biologia Celular, Universidade de Brasília, Brasilia, DF, 70910-900, Brazil. msueli@unb.br.
Journal: Rev Iberoam Micol. 22(4):203-12
Publication Date: Monday, February 27, 2006
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How did Saccharomyces evolve to become a good brewer?
by Piškur J, Rozpedowska E, Polakova S, Merico A, Compagno C.
Affliation: Cell and Organism Biology, Lund University, Sölvegatan 35, 22362 Lund, Sweden.
Journal: Trends Genet. :
Publication Date: Monday, February 27, 2006
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Global suppression of the host antiviral response by ebola- and marburgviruses: increased antagonism of the type I interferon response is associated with enhanced virulence.
by Kash JC, Mühlberger E, Carter V, Grosch M, Perwitasari O, Proll SC, Thomas MJ, Weber F, Klenk HD, Katze MG.
Affliation: Department of Microbiology, University of Washington School of Medicine, Box 358070, Seattle, WA 98195-8070. jkash@u.washington.edu.
Journal: J Virol. 80(6):3009-20
Publication Date: Monday, February 27, 2006
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Genomics of berry fruits antioxidant components.
by D'Amico E, Perrotta G.
Affliation: ENEA Centro Ricerche Trisaia, Rotondella (MT), Italy.
Journal: Biofactors. 23(4):179-87
Publication Date: Friday, February 24, 2006
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Theoretical model of restriction endonuclease HpaI in complex with DNA, predicted by fold recognition and validated by site-directed mutagenesis.
by Skowronek KJ, Kosinski J, Bujnicki JM.
Affliation: International Institute of Molecular and Cell Biology, Warsaw, Poland.
Journal: Proteins. :
Publication Date: Friday, February 24, 2006
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Yeast systems biology to unravel the network of life.
by Mustacchi R, Hohmann S, Nielsen J.
Affliation: Centre for Microbial Biotechnology (CMB), Building 223, BioCentrum-DTU, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark.
Journal: Yeast. 23(3):227-238
Publication Date: Friday, February 24, 2006
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ABRF 2006: Integrating science, tools and technologies with systems biology. February 11-14, 2006, Long Beach, California, USA. Abstracts.
by
Affliation:
Journal: J Biomol Tech. 17(1):1-89
Publication Date: Thursday, February 23, 2006
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Calmodulin signaling: Analysis and prediction of a disorder-dependent molecular recognition.
by Radivojac P, Vucetic S, O'connor TR, Uversky VN, Obradovic Z, Dunker AK.
Affliation: School of Informatics, Indiana University, Bloomington, Indiana.
Journal: Proteins. :
Publication Date: Wednesday, February 22, 2006
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Score statistics of global sequence alignment from the energy distribution of a modified directed polymer and directed percolation problem.
by Sardiu ME, Alves G, Yu YK.
Affliation: Department of Physics, Florida Atlantic University, Boca Raton, Florida 33431, USA and National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA.
Journal: Phys Rev E Stat Nonlin Soft Matter Phys. 72(6-1):061917
Publication Date: Monday, February 20, 2006
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A Comprehensive Software Suite for the Analysis of cDNAs.
by Arakawa K, Suzuki H, Fujishima K, Fujimoto K, Ueda S, Matsui M, Tomita M.
Affliation: Institute for Advanced Biosciences, Keio University, Fujisawa 252-8520, Japan. mt@sfc.keio.ac.jp.
Journal: Genomics Proteomics Bioinformatics. 3(3):179-88
Publication Date: Monday, February 20, 2006
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Structural bioinformatics of DNA: a web based tool for the analysis of molecular dynamics results and structure prediction.
by Dixit SB, Beveridge DL.
Affliation: Department of Chemistry and Molecular Biophysics Program, Hall-Atwater Laboratories, Wesleyan University, Middletown CT 06459.
Journal: Bioinformatics. :
Publication Date: Monday, February 20, 2006
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Identification of Transcriptionally Active Open Reading Frames within the RD1 Genomic Segment of Mycobacterium tuberculosis.
by Amoudy HA, Al-Turab MB, Mustafa AS.
Affliation: Department of Microbiology, Faculty of Medicine, Kuwait University, Kuwait.
Journal: Med Princ Pract. 15(2):137-44
Publication Date: Friday, February 17, 2006
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Structure Modeling of All Identified G Protein-Coupled Receptors in the Human Genome.
by Zhang Y, Devries ME, Skolnick J.
Affliation: Center of Excellence in Bioinformatics, University at Buffalo, Buffalo, New York, United States of America.
Journal: PLoS Comput Biol. 2(2):e13
Publication Date: Friday, February 17, 2006
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maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments.
by Conesa A, Nueda MJ, Ferrer A, Talón M.
Affliation: Centro de Genómica, Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113, Moncada, Valencia (Spain).
Journal: Bioinformatics. :
Publication Date: Thursday, February 16, 2006
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Adapters, shims, and glue - service interoperability for in silico experiments.
by Radetzki U, Leser U, Schulze-Rauschenbach SC, Zimmermann J, Lüssem J, Bode T, Cremers AB.
Affliation: Department of Computer Science, University of Bonn, D-53117 Bonn, Germany.
Journal: Bioinformatics. :
Publication Date: Thursday, February 16, 2006
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Functional bioinformatics for Arabidopsis thaliana.
by Clare A, Karwath A, King RD.
Affliation: Dept of Computer Science, University of Wales Aberystwyth, SY23 3DB, UK.
Journal: Bioinformatics. :
Publication Date: Thursday, February 16, 2006
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Advancing Glycomics: Implementation Strategies at the Consortium for Functional Glycomics.
by Raman R, Venkataraman M, Ramakrishnan S, Lang W, Raguram S, Sasisekharan R.
Affliation: Biological Engineering Division, Center for Biomedical Engineering, Center for Environmental Health Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139.
Journal: Glycobiology. :
Publication Date: Wednesday, February 15, 2006
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PhyloGibbs: A Gibbs Sampling Motif Finder That Incorporates Phylogeny.
by Siddharthan R, Siggia ED, van Nimwegen E.
Affliation: Center for Studies in Physics and Biology, The Rockefeller University, New York, New York, United States of America.
Journal: PLoS Comput Biol. 1(7):e67
Publication Date: Tuesday, February 14, 2006
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