What makes a gene name? Named entity recognition in the biomedical literature.
by Leser U, Hakenberg J.
Affliation: Department for Computer Science, Humboldt-Universität zu Berlin, Rudower Chaussee 25, Germany. leser@informatik.hu-berlin.de
Journal: Brief Bioinform. 6(4):357-69
Publication Date: Thursday, January 19, 2006
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Software agents in molecular computational biology.
by Keele JW, Wray JE.
Affliation: United States Meat Animal Research Center, State Spur 18D, Clay Center, Nebraska 68933, USA. keele@email.marc.usda.gov
Journal: Brief Bioinform. 6(4):370-9
Publication Date: Thursday, January 19, 2006
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Detecting horizontal gene transfer with T-REX and RHOM programs.
by Li Z, Wang L, Zhong Y.
Affliation: School of Life Sciences, Fudan University, Shanghai 200433, China and Shanghai Center for Bioinformation Technology, China.
Journal: Brief Bioinform. 6(4):394-401
Publication Date: Thursday, January 19, 2006
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Molecular processes during fat cell development revealed by gene expression profiling and functional annotation.
by Hackl H, Burkard TR, Sturn A, Rubio R, Schleiffer A, Tian S, Quackenbush J, Eisenhaber F, Trajanoski Z.
Affliation: Institute for Genomics and Bioinformatics and Christian Doppler Laboratory for Genomics and Bioinformatics, Graz University of Technology, Petersgasse 14, 8010 Graz, Austria. hubert.hackl@tugraz.at.
Journal: Genome Biol. 6(13):R108
Publication Date: Thursday, January 19, 2006
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Discovery of time-delayed gene regulatory networks based on temporal gene expression profiling.
by Li X, Rao S, Jiang W, Li C, Xiao Y, Guo Z, Zhang Q, Wang L, Du L, Li J, Li L, Zhang T, Wang QK.
Affliation:
Journal: BMC Bioinformatics. 7(1):26
Publication Date: Thursday, January 19, 2006
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An interactive power analysis tool for microarray hypothesis testing and generation.
by Seo J, Gordish-Dressman H, Hoffman EP.
Affliation: Research Center for Genetic Medicine, Children's National Medical Center, Washington DC, 20010, USA.
Journal: Bioinformatics. :
Publication Date: Wednesday, January 18, 2006
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Small RNAs in Human Brain Development and Disorders.
by Rogaev EI.
Affliation: Brudnick Neuropsychiatric Research Institute, Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA 01604, USA. Evgeny.Rogaev@umassmed.edu.
Journal: Biochemistry (Mosc). 70(12):1404-7
Publication Date: Wednesday, January 18, 2006
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A segment of the Apospory Specific Genomic Region (ASGR) is highly microsyntenic not only between the apomicts Pennisetum squamulatum and Cenchrus ciliaris, but also with a rice chromosome 11 centromeric-proximal genomic region.
by Gualtieri G, Conner JA, Morishige DT, Moore LD, Mullet JE, Ozias-Akins P.
Affliation: Department of Horticulture, The University of Georgia Tifton Campus, Tifton, GA 31793-0748; Present address: School of Integrative Biology, Faculty of Biological and Chemical Sciences, The University of Queensland, Brisbane Qld 4072 Australia.
Journal: Plant Physiol. :
Publication Date: Tuesday, January 17, 2006
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Studies of folding and misfolding using simplified models.
by Dokholyan NV.
Affliation: Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, School of Medicine, Chapel Hill, NC 27599, USA.
Journal: Curr Opin Struct Biol. :
Publication Date: Tuesday, January 17, 2006
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Integration Specificity of Phage varphiC31 Integrase in the Human Genome.
by Chalberg TW, Portlock JL, Olivares EC, Thyagarajan B, Kirby PJ, Hillman RT, Hoelters J, Calos MP.
Affliation: Department of Genetics, Stanford University School of Medicine, Stanford, CA 95305-5120, USA.
Journal: J Mol Biol. :
Publication Date: Tuesday, January 17, 2006
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Use of genomics to select antibacterial targets.
by Pucci MJ.
Affliation: Achillion Pharmaceuticals, Inc., 300 George Street, New Haven, CT 06511, United States.
Journal: Biochem Pharmacol. :
Publication Date: Tuesday, January 17, 2006
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Identification of human liver mitochondrial aldehyde dehydrogenase as a potential target for microcystin-LR.
by Chen T, Cui J, Liang Y, Xin X, Owen Young D, Chen C, Shen P.
Affliation: State Key Laboratory of Pharmaceutical Biotechnology, Department of Biochemistry, Nanjing University, Nanjing 210093, China.
Journal: Toxicology. :
Publication Date: Tuesday, January 17, 2006
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Plant metabolomics: from holistic hope, to hype, to hot topic.
by Hall RD.
Affliation: Plant Research International, Business Unit Bioscience, PO Box 16, 6700 AA Wageningen, the Netherlands; Centre for BioSystems Genomics, PO Box 98, 6700 AB Wageningen, the Netherlands.
Journal: New Phytol. 169(3):453-68
Publication Date: Tuesday, January 17, 2006
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Analysis of the intraclonal diversity of HLA-A0201-restricted T lymphocyte epitopes in follicular lymphoma idiotype.
by Molinier-Frenkel V, Popa N, Poulot V, Chaise C, Marquet J, Haioun C, Gaulard P, Farcet JP, Delfau-Larue MH.
Affliation: INSERM, U617, Créteil, F-94000, France.
Journal: Br J Haematol. 132(4):459-68
Publication Date: Tuesday, January 17, 2006
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Prediction of protein structural class with Rough Sets.
by Cao Y, Liu S, Zhang L, Qin J, Wang J, Tang K.
Affliation:
Journal: BMC Bioinformatics. 7(1):20
Publication Date: Tuesday, January 17, 2006
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Thrombin-like enzymes from venom gland of Deinagkistrodon acutus: cDNA cloning, mechanism of diversity and phylogenetic tree construction.
by Zha XD, Huang HS, Zhou LZ, Liu J, Xu KS.
Affliation: School of Life Sciences, Anhui University, Hefei 230039, China xdcha@163.com.
Journal: Acta Pharmacol Sin. 27(2):184-92
Publication Date: Tuesday, January 17, 2006
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Maximum likelihood estimates of allele frequencies and error rates from samples of related individuals by gene counting.
by Thomas A, Camp NJ.
Affliation: Department of Medical Informatics, University of Utah, 391 Chipeta Way Suite D, Salt Lake City, UT 84108, USA.
Journal: Bioinformatics. :
Publication Date: Friday, January 13, 2006
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[Proteomic analysis of prostate cancer using surface enhanced laser desorption/ionization mass spectrometry.]
by Pan YZ, Xiao XY, Zhao D, Zhang L, Ji GY, Li Y, He DC, Zhao XJ, Yang BX.
Affliation: Department of Pathophysiology, Basic Medical School, Jilin University, Changchun 130021, China.
Journal: Zhonghua Yi Xue Za Zhi. 85(45):3172-5
Publication Date: Thursday, January 12, 2006
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Multipurpose MRG Domain Involved in Cell Senescence and Proliferation Exhibits Structural Homology to a DNA-Interacting Domain.
by Bowman BR, Moure CM, Kirtane BM, Welschhans RL, Tominaga K, Pereira-Smith OM, Quiocho FA.
Affliation: Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas 77030.
Journal: Structure. 14(1):151-8
Publication Date: Thursday, January 12, 2006
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A functional -1 ribosomal frameshift signal in the human paraneoplastic Ma3 gene.
by Wills NM, Moore B, Hammer A, Gesteland RF, Atkins JF.
Affliation: Human Genetics, University of Utah, Salt Lake City, UT 84112-5330.
Journal: J Biol Chem. :
Publication Date: Thursday, January 12, 2006
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