Using bioinformatics to keep "pay for performance" fair: a modest proposal.
by Stein SC.
Affliation: University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19106, USA. sherman.stein@uphs.upenn.edu
Journal: Neurosurg Focus. 19(4):E7
Publication Date: Monday, October 24, 2005
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Pokemon expression in malignant glioma: an application of bioinformatics methods.
by Rovin RA, Winn R.
Affliation: Marquette General Hospital, Department of Biology, Northern Michigan University, Marquette, Michigan, USA. rarovin@penmed.com
Journal: Neurosurg Focus. 19(4):E8
Publication Date: Monday, October 24, 2005
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A method of precise mRNA/DNA homology-based gene structure prediction.
by Churbanov A, Pauley M, Quest D, Ali H.
Affliation:
Journal: BMC Bioinformatics. 6(1):261
Publication Date: Monday, October 24, 2005
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Analysis of the regulation of lin-41 during chick and mouse limb development.
by Lancman JJ, Caruccio NC, Harfe BD, Pasquinelli AE, Schageman JJ, Pertsemlidis A, Fallon JF.
Affliation: Department of Anatomy, University of Wisconsin, Madison, Wisconsin.
Journal: Dev Dyn. :
Publication Date: Monday, October 24, 2005
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The Protein Circular Dichroism Data Bank (PCDDB): A bioinformatics and spectroscopic resource.
by Wallace BA, Whitmore L, Janes RW.
Affliation: Department of Crystallography, Birkbeck College, University of London, London, United Kingdom.
Journal: Proteins. :
Publication Date: Monday, October 24, 2005
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A searchable database for proteomes of oral microorganisms.
by Nakano Y, Shibata Y, Kawada M, Kojima M, Fukamachi H, Shibata Y, Okano S, Matsushima K, Abiko Y, Yamashita Y.
Affliation: Department of Preventive Dentistry, Kyushu University Faculty of Dental Science, Fukuoka, Japan.
Journal: Oral Microbiol Immunol. 20(6):344-8
Publication Date: Friday, October 21, 2005
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[Screening of prothrombotic state-related genes from human hepatic cDNA library]
by Cui XY, Tang H, Fang DZ, Liu BW.
Affliation: Preclinical and Forensic Medicine, Sichuan University, Chengdu 610041, China.
Journal: Sichuan Da Xue Xue Bao Yi Xue Ban. 36(5):605-8
Publication Date: Thursday, October 20, 2005
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Intracellular domain of nicotinic acetylcholine receptor: the importance of being unfolded.
by Kukhtina V, Kottwitz D, Strauss H, Heise B, Chebotareva N, Tsetlin V, Hucho F.
Affliation: Institute of Biochemistry, Free University of Berlin, Berlin, Germany.
Journal: J Neurochem. :
Publication Date: Thursday, October 20, 2005
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A genome-wide survey demonstrates widespread non-linear mRNA in expressed sequences from multiple species.
by Dixon RJ, Eperon IC, Hall L, Samani NJ.
Affliation: Department of Cardiovascular Sciences, University of Leicester, Clinical Sciences Wing, Glenfield Hospital, Leicester LE3 9QP, UK. rd67@le.ac.uk
Journal: Nucleic Acids Res. 33(18):5904-13
Publication Date: Thursday, October 20, 2005
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Abundance of correctly folded RNA motifs in sequence space, calculated on computational grids.
by Knight R, De Sterck H, Markel R, Smit S, Oshmyansky A, Yarus M.
Affliation: Department of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309-0215, USA. rob@spot.colorado.edu
Journal: Nucleic Acids Res. 33(18):5924-35
Publication Date: Thursday, October 20, 2005
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Functional genomics and gene expression profiling in sepsis: beyond class prediction.
by Feezor RJ, Cheng A, Paddock HN, Baker HV, Moldawer LL.
Affliation: Department of Surgery, University of Florida College of Medicine, Gainesville, FL 32610, USA.
Journal: Clin Infect Dis. 41 Suppl 7:S427-35
Publication Date: Thursday, October 20, 2005
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Screening of hepatocyte proteins binding to F protein of hepatitis C virus by yeast two-hybrid system.
by Huang YP, Cheng J, Zhang SL, Wang L, Guo J, Liu Y, Yang Y, Zhang LY, Bai GQ, Gao XS, Ji D, Lin SM, Shao Q.
Affliation: Department of Pediatrics, the First Hospital of Xi'an Jiaotong University, Xi'an 710061, Shaanxi Province, China. huangyp423@126.com.
Journal: World J Gastroenterol. 11(36):5659-65
Publication Date: Thursday, October 20, 2005
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Metabolic engineering - Integrating methodologies of molecular breeding and bioprocess systems engineering.
by Shimizu H.
Affliation: Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.
Journal: J Biosci Bioeng. 94(6):563-73
Publication Date: Wednesday, October 19, 2005
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Representations of molecular pathways: an evaluation of SBML, PSI MI and BioPAX.
by Strömbäck L, Lambrix P.
Affliation: Department of Computer and Information Science, Linköpings universitet, S-581 83 Linköping, Sweden.
Journal: Bioinformatics. :
Publication Date: Wednesday, October 19, 2005
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Evaluating and improving cDNA sequence quality with cQC.
by Hayden CA, Wheeler TJ, Jorgensen RA.
Affliation: Department of Plant Sciences, University of Arizona, Tucson, AZ 85721-0036, USA.
Journal: Bioinformatics. :
Publication Date: Wednesday, October 19, 2005
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Oct4 pseudogenes are transcribed in cancers.
by Suo G, Han J, Wang X, Zhang J, Zhao Y, Zhao Y, Dai J.
Affliation: Center of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100080, China; Graduate School, Chinese Academy of Sciences, Beijing 100080, China.
Journal: Biochem Biophys Res Commun. :
Publication Date: Tuesday, October 18, 2005
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Using proteomic approaches to identify new biomarkers for detection and monitoring of ovarian cancer.
by Kong F, Nicole White C, Xiao X, Feng Y, Xu C, He D, Zhang Z, Yu Y.
Affliation: Gynecology and Obstetrics Hospital of Fudan University, Shanghai, China.
Journal: Gynecol Oncol. :
Publication Date: Tuesday, October 18, 2005
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Bioinformatic Analysis of Circadian Gene Oscillation in Mouse Aorta.
by Rudic RD, McNamara P, Reilly D, Grosser T, Curtis AM, Price TS, Panda S, Hogenesch JB, Fitzgerald GA.
Affliation: Institute for Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia.
Journal: Circulation. :
Publication Date: Tuesday, October 18, 2005
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External cross-validation for unbiased evaluation of protein family detectors: Application to allergens.
by Soeria-Atmadja D, Wallman M, Björklund AK, Isaksson A, Hammerling U, Gustafsson MG.
Affliation: Division of Toxicology, National Food Administration, Uppsala, Sweden.
Journal: Proteins. :
Publication Date: Tuesday, October 18, 2005
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Machine learning in bioinformatics: A brief survey and recommendations for practitioners.
by Bhaskar H, Hoyle DC, Singh S.
Affliation: School of Engineering, Computer Science & Mathematics, University of Exeter, Exeter EX4 4QF, UK.
Journal: Comput Biol Med. :
Publication Date: Monday, October 17, 2005
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