Host-derived pathogenicity islands in poxviruses.
by Da Silva M, Upton C.
Affliation:
Journal: Virol J. 2(1):30
Publication Date: Tuesday, April 12, 2005
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Genomic peculiarity of coding sequences and metabolic potential of probiotic Escherichia coli strain Nissle 1917 inferred from raw genome data.
by Sun J, Gunzer F, Westendorf AM, Buer J, Scharfe M, Jarek M, Gößling F, Blöcker H, Zeng AP.
Affliation: GBF – German Research Centre for Biotechnology, Experimental Bioinformatics, Mascheroder Weg 1, D-38124 Braunschweig, Germany.
Journal: J Biotechnol. 117(2):147-161
Publication Date: Tuesday, April 12, 2005
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Identification of a functional hypoxia-responsive element that regulates the expression of the egl nine homologue 3 (egln3/phd3) gene.
by Pescador N, Cuevas Y, Naranjo S, Alcaide M, Villar D, Landázuri MO, Del Peso L.
Affliation:
Journal: Biochem J. :
Publication Date: Tuesday, April 12, 2005
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Two forms of the large tumor suppressor gene (Lats1) protein expressed in the vertebrate retina.
by Akhmedov NB, Yamashita CK, Tran D, Piri NI, Aguirre GD, Farber DB.
Affliation: Jules Stein Eye Institute, UCLA School of Medicine, 100 Stein Plaza, Los Angeles, CA 90095, USA. akhmedov@jsei.ucla.edu
Journal: Biochim Biophys Acta. 1728(1-2):11-7
Publication Date: Tuesday, April 12, 2005
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Wnt pathway curation using automated natural language processing: combining statistical methods with partial and full parse for knowledge extraction.
by Santos C, Eggle D, States DJ.
Affliation: Bioinformatics Program, The University of Michigan Ann Arbor, MI 48109, USA.
Journal: Bioinformatics. 21(8):1653-8
Publication Date: Monday, April 11, 2005
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VitaPad: visualization tools for the analysis of pathway data.
by Holford M, Li N, Nadkarni P, Zhao H.
Affliation: Center for Statistical Genomics and Proteomics, Yale University New Haven, CT 06520, USA.
Journal: Bioinformatics. 21(8):1596-602
Publication Date: Monday, April 11, 2005
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Clustering algorithms for identifying core atom sets and for assessing the precision of protein structure ensembles.
by Snyder DA, Montelione GT.
Affliation: Center for Advanced Biotechnology and Medicine, Department of Molecular Biology and Biochemistry, and Northeast Structural Genomics Consortium, Rutgers University, Piscataway, New Jersey.
Journal: Proteins. :
Publication Date: Monday, April 11, 2005
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Immunology and mathematics: crossing the divide.
by Callard RE, Yates AJ.
Affliation: Immunobiology Unit, Institute of Child Health and CoMPLEX, University College London, London UK. rcallard@ich.ucl.ac.uk
Journal: Immunology. 115(1):21-33
Publication Date: Monday, April 11, 2005
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Shortest triplet clustering: reconstructing large phylogenies using representative sets.
by Vinh LS, von Haeseler A.
Affliation:
Journal: BMC Bioinformatics. 6(1):92
Publication Date: Monday, April 11, 2005
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Experimental and bioinformatic approaches for interrogating protein-protein interactions to determine protein function.
by Droit A, Poirier GG, Hunter JM.
Affliation: Health and Environment Unit, Faculty of Medicine, Eastern Quebec Proteomics Centre, 2705 Laurier Blvd, Ste-Foy, Quebec, Canada G1 V 4 G2.
Journal: J Mol Endocrinol. 34(2):263-80
Publication Date: Monday, April 11, 2005
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High accuracy prediction of beta-turns and their types using propensities and multiple alignments.
by Fuchs PF, Alix AJ.
Affliation: Equipe de Bioinformatique Génomique et Moléculaire (EBGM), INSERM EMI 0346, Université Paris 7, Paris, France.
Journal: Proteins. :
Publication Date: Monday, April 11, 2005
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Retropseudogenes derived from the human Ro/SS-A autoantigen-associated hY RNAs.
by Perreault J, Noël JF, Brière F, Cousineau B, Lucier JF, Perreault JP, Boire G.
Affliation: RNA group/Groupe ARN, Université de Sherbrooke Sherbrooke, Quebec, J1H 5N4, Canada.
Journal: Nucleic Acids Res. 33(6):2032-41
Publication Date: Friday, April 08, 2005
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New Members of the Insulin Family: Regulators of Metabolism, Growth and Now . . . Reproduction.
by Lu C, Lam HN, Menon RK.
Affliation: Department of Pediatrics, C.S. Mott Children’s Hospital, University of Michigan Medical School, Ann Arbor, Michigan, 48109.
Journal: Pediatr Res. :
Publication Date: Friday, April 08, 2005
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Protein purification: pure but not simple.
by Chapman T.
Affliation:
Journal: Nature. 434(7034):795-8
Publication Date: Thursday, April 07, 2005
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Bioinformatics.
by
Affliation:
Journal: Nat Biotechnol. 23(4):493
Publication Date: Thursday, April 07, 2005
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Regulation of ecdysteroid signalling during Drosophila development: identification, characterization and modelling of ecdysone oxidase, an enzyme involved in control of ligand concentration.
by Takeuchi H, Rigden DJ, Ebrahimi B, Turner PC, Rees HH.
Affliation:
Journal: Biochem J. :
Publication Date: Thursday, April 07, 2005
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Workflows in bioinformatics: meta-analysis and prototype implementation of a workflow generator.
by Garcia A, Thoraval S, Garcia LJ, Ragan MA.
Affliation:
Journal: BMC Bioinformatics. 6(1):87
Publication Date: Thursday, April 07, 2005
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Multiclass cancer classification and biomarker discovery using GA-based algorithms.
by Liu JJ, Cutler G, Li W, Pan Z, Peng S, Hoey T, Chen L, Ling XB.
Affliation: Tularik Inc., South San Francisco, California, 94080, USA.
Journal: Bioinformatics. :
Publication Date: Thursday, April 07, 2005
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An integrated approach: systems biology seeks order in complexity.
by Longtin R.
Affliation:
Journal: J Natl Cancer Inst. 97(7):476-8
Publication Date: Wednesday, April 06, 2005
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Synthetic peptides derived from SARS coronavirus S protein with diagnostic and therapeutic potential.
by Lu W, Wu XD, Shi MD, Yang RF, He YY, Bian C, Shi TL, Yang S, Zhu XL, Jiang WH, Li YX, Yan LC, Ji YY, Lin Y, Lin GM, Tian L, Wang J, Wang HX, Xie YH, Pei G, Wu JR, Sun B.
Affliation: Laboratory of Molecular Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, Shanghai 200031, China.
Journal: FEBS Lett. 579(10):2130-6
Publication Date: Wednesday, April 06, 2005
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