Detection and analysis of alternative splicing in the silkworm by aligning expressed sequence tags with the genomic sequence.
by Zha XF, Xia QY, Zhao P, Li J, Duan J, Wang ZL, Qian JF, Xiang ZH.
Affliation: The Key Sericultural Laboratory of Agricultural Ministry, Southwest Agricultural University, Chongqing, China.
Journal: Insect Mol Biol. 14(2):113-9
Publication Date: Wednesday, March 30, 2005
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Expressed sequence tags from Diabrotica virgifera virgifera midgut identify a coleopteran cadherin and a diversity of cathepsins.
by Siegfried BD, Waterfield N, ffrench-Constant RH.
Affliation: Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE, USA. bsiegfried1@unl.edu
Journal: Insect Mol Biol. 14(2):137-43
Publication Date: Wednesday, March 30, 2005
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Formalising concepts of species, sex and developmental stage in anatomical ontologies.
by Aitken S.
Affliation: School of Informatics, The University of Edinburgh, Edinburgh EH8 9LE, UK.
Journal: Bioinformatics. :
Publication Date: Wednesday, March 30, 2005
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Bioinformatic and enzymatic characterization of the MAPEG superfamily.
by Bresell A, Weinander R, Lundqvist G, Raza H, Shimoji M, Sun TH, Balk L, Wiklund R, Eriksson J, Jansson C, Persson B, Jakobsson PJ, Morgenstern R.
Affliation: IFM Bioinformatics, Linköping University, Sweden.
Journal: FEBS J. 272(7):1688-703
Publication Date: Tuesday, March 29, 2005
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Accelerated probabilistic inference of RNA structure evolution.
by Holmes I.
Affliation:
Journal: BMC Bioinformatics. 6(1):73
Publication Date: Friday, March 25, 2005
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Tyrosine phosphorylation of myosin heavy chain during skeletal muscle differentiation: an integrated bioinformatics approach.
by Harney DF, Butler RK, Edwards RJ.
Affliation:
Journal: Theor Biol Med Model. 2(1):12
Publication Date: Friday, March 25, 2005
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Osteo-Promoter Database (OPD) - Promoter analysis in skeletal cells.
by Grienberg I, Benayahu D.
Affliation:
Journal: BMC Genomics. 6(1):46
Publication Date: Friday, March 25, 2005
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Identification of developmental pluripotency associated 5 expression in human pluripotent stem cells.
by Kim SK, Suh MR, Yoon HS, Lee JB, Oh SK, Moon SY, Moon SH, Lee JY, Hwang JH, Cho WJ, Kim KS.
Affliation: Hanyang University College of Medicine, 17 Haengdang-dong, Sungdong-gu, Seoul 133-791, Korea. ks66kim@hanyang.ac.kr.
Journal: Stem Cells. 23(4):458-62
Publication Date: Friday, March 25, 2005
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Gene Expression Profile Studies of Human Keratoconus Cornea for NEIBank: A Novel Cornea-Expressed Gene and the Absence of Transcripts for Aquaporin 5.
by Rabinowitz YS, Dong L, Wistow G.
Affliation: Cornea Genetic Eye Institute, Cedars-Sinai Medical Center, Los Angeles, California.
Journal: Invest Ophthalmol Vis Sci. 46(4):1239-46
Publication Date: Friday, March 25, 2005
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Improved access to sequential motifs: a note on the architectural bias of recurrent networks.
by Bodén M, Hawkins J.
Affliation:
Journal: IEEE Trans Neural Netw. 16(2):491-4
Publication Date: Thursday, March 24, 2005
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Wildfire: distributed, Grid-enabled workflow construction and execution.
by Tang F, Chua CL, Ho LY, Lim YP, Issac P, Krishnan A.
Affliation:
Journal: BMC Bioinformatics. 6(1):69
Publication Date: Thursday, March 24, 2005
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Influence of the pi-pi interaction on the hydrogen bonding capacity of stacked DNA/RNA bases.
by Mignon P, Loverix S, Steyaert J, Geerlings P.
Affliation: Eenheid Algemene Chemie (ALGC), Faculteit Wetenschappen, Vrije Universiteit Brussel Pleinlaan 2, 1050 Brussels, Belgium.
Journal: Nucleic Acids Res. 33(6):1779-89
Publication Date: Thursday, March 24, 2005
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Sequence-structure-function relationships of a tRNA (m(7)G46) methyltransferase studied by homology modeling and site-directed mutagenesis.
by Purta E, van Vliet F, Tricot C, De Bie LG, Feder M, Skowronek K, Droogmans L, Bujnicki JM.
Affliation: Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology, Warsaw, Poland.
Journal: Proteins. :
Publication Date: Thursday, March 24, 2005
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Identification of cDNAs associated with late dedifferentiation in adult newt forelimb regeneration.
by Vascotto SG, Beug S, Liversage RA, Tsilfidis C.
Affliation: University of Ottawa Eye Institute, Ottawa Health Research Institute, Ottawa, Ontario, Canada.
Journal: Dev Dyn. :
Publication Date: Thursday, March 24, 2005
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Comparison of computational methods for the identification of cell cycle-regulated genes.
by de Lichtenberg U, Jensen LJ, Fausbøll A, Jensen TS, Bork P, Brunak S.
Affliation: Center for Biological Sequence Analysis, Technical University of Denmark DK-2800 Lyngby, Denmark.
Journal: Bioinformatics. 21(7):1164-71
Publication Date: Thursday, March 24, 2005
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Inference of S-system models of genetic networks using a cooperative coevolutionary algorithm.
by Kimura S, Ide K, Kashihara A, Kano M, Hatakeyama M, Masui R, Nakagawa N, Yokoyama S, Kuramitsu S, Konagaya A.
Affliation: Bioinformatics Group, RIKEN Genomic Sciences Center 1-7-22 Suehiro-cho, Tsurumi, Yokohama 230-0045, Japan.
Journal: Bioinformatics. 21(7):1154-63
Publication Date: Thursday, March 24, 2005
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An improved algorithm for stoichiometric network analysis: theory and applications.
by Urbanczik R, Wagner C.
Affliation: Institute of Pharmacology, University of Bern Friedbuehlstrasse 49, CH-3010 Bern, Switzerland.
Journal: Bioinformatics. 21(7):1203-10
Publication Date: Thursday, March 24, 2005
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ISYMOD: a knowledge warehouse for the identification, assembly and analysis of bacterial integrated systems.
by Chabalier J, Capponi C, Quentin Y, Fichant G.
Affliation: Laboratoire d'Informatique Fondamentale de Marseille 39 rue Joliot Curie 13453 Marseille cedex 13, France.
Journal: Bioinformatics. 21(7):1246-56
Publication Date: Thursday, March 24, 2005
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Local correlation of expression profiles with gene annotations--proof of concept for a general conciliatory method.
by Pinto FR, Cowart LA, Hannun YA, Rohrer B, Almeida JS.
Affliation: Biomathematics Group, Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa 2781-901 Oeiras, Portugal.
Journal: Bioinformatics. 21(7):1037-45
Publication Date: Thursday, March 24, 2005
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SABmark--a benchmark for sequence alignment that covers the entire known fold space.
by Van Walle I, Lasters I, Wyns L.
Affliation: Department of Ultrastructure, Vrije Universiteit Brussel Pleinlaan 2, 1050 Brussel, Belgium.
Journal: Bioinformatics. 21(7):1267-8
Publication Date: Thursday, March 24, 2005
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