Engineering disulfide bonds of the novel human beta-defensins hBD-27 and hBD-28: Differences in disulfide formation and biological activity among human beta-defensins.
by Schulz A, Klüver E, Schulz-Maronde S, Adermann K.
Affliation: IPF PharmaCeuticals GmbH, Feodor-Lynen-Strasse 31, D-30625 Hannover, Germany.
Journal: Biopolymers. :
Publication Date: Thursday, December 30, 2004
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MOLE: a data management application based on a protein production data model.
by Morris C, Wood P, Griffiths SL, Wilson KS, Ashton AW.
Affliation: Daresbury Laboratory, Daresbury, Warrington, WA4 4AD, United Kingdom.
Journal: Proteins. 58(2):285-9
Publication Date: Wednesday, December 29, 2004
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A novel high aspect ratio microfluidic design to provide a stable and uniform microenvironment for cell growth in a high throughput mammalian cell culture array.
by Hung PJ, Lee PJ, Sabounchi P, Aghdam N, Lin R, Lee LP.
Affliation: Berkeley Sensor & Actuator Center, Department of Bioengineering, University of California, Berkeley, California, USA. lplee@socrates.berkeley.edu.
Journal: Lab Chip. 5(1):44-8
Publication Date: Thursday, December 23, 2004
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NdPASA: A novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities.
by Wang J, Feng JA.
Affliation: Department of Chemistry, Temple University, Philadelphia, Pennsylvania.
Journal: Proteins. :
Publication Date: Thursday, December 23, 2004
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Mapping protein-protein interactions by bioinformatics and cross-linking.
by Friedhoff P.
Affliation: Institut für Biochemie (FB 08), Justus-Liebig-Universität, Giessen Heinrich-Buff-Ring 58, 35392, Giessen, Germany, friedhoff@chemie.bio.uni-giessen.de.
Journal: Anal Bioanal Chem. :
Publication Date: Wednesday, December 22, 2004
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A framework for scientific data modeling and automated software development.
by Fogh RH, Boucher W, Vranken WF, Pajon A, Stevens TJ, Bhat TN, Westbrook J, Ionides JM, Laue ED.
Affliation: Department of Biochemistry, University of Cambridge, 80 Tennis Court Road, Cambridge, CB2 1GA, UK.
Journal: Bioinformatics. :
Publication Date: Wednesday, December 22, 2004
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A structure-based method for protein sequence alignment.
by Kann MG, Thiessen PA, Panchenko AR, Schäffer AA, Altschul SF, Bryant SH.
Affliation: National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Department of Health and Human Services, Bethesda, MD 20894, USA.
Journal: Bioinformatics. :
Publication Date: Wednesday, December 22, 2004
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Identification and integrative analysis of 28 novel genes specifically expressed and developmentally regulated in murine spermatogenic cells.
by Hong S, Choi I, Woo JM, Oh J, Kim T, Choi E, Kim TW, Jung YK, Kim DH, Sun CH, Yi GS, Eddy EM, Cho C.
Affliation: Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712.
Journal: J Biol Chem. :
Publication Date: Wednesday, December 22, 2004
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Improved prediction of protein-protein binding sites using a support vector machines approach.
by Bradford JR, Westhead DR.
Affliation: School Of Biochemistry and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.
Journal: Bioinformatics. :
Publication Date: Wednesday, December 22, 2004
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GMD@CSB.DB: the Golm metabolome database.
by Kopka J, Schauer N, Krueger S, Birkemeyer C, Usadel B, Bergmüller E, Dörmann P, Gibon Y, Stitt M, Willmitzer L, Fernie AR, Steinhauser D.
Affliation: Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Golm, Germany.
Journal: Bioinformatics. :
Publication Date: Wednesday, December 22, 2004
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Protein microarrays: catching the proteome.
by Poetz O, Schwenk JM, Kramer S, Stoll D, Templin MF, Joos TO.
Affliation: NMI Natural and Medical Sciences Institute at the University of Tübingen, Markwiesenstr. 55, 72770 Reutlingen, Germany.
Journal: Mech Ageing Dev. 126(1):161-70
Publication Date: Tuesday, December 21, 2004
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From worm to human: bioinformatics approaches to identify FOXO target genes.
by Xuan Z, Zhang MQ.
Affliation: Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
Journal: Mech Ageing Dev. 126(1):209-15
Publication Date: Tuesday, December 21, 2004
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Genetic regulation of thymic involution.
by Hsu HC, Li L, Zhang HG, Mountz JD.
Affliation: Division of Clinical Immunology and Rheumatology, Department of Medicine, The University of Alabama at Birmingham, 701 South 19th Street, LHRB 473, Birmingham, AL 35294, USA.
Journal: Mech Ageing Dev. 126(1):87-97
Publication Date: Tuesday, December 21, 2004
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FunnyBase: a systems level functional annotation of Fundulus ESTs for the analysis of gene expression.
by Paschall JE, Oleksiak MF, Vanwye JD, Roach JL, Whitehead A, Wykoff GJ, Kolell KJ, Crawford DL.
Affliation:
Journal: BMC Genomics. 5(1):96
Publication Date: Tuesday, December 21, 2004
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openSputnik--a database to ESTablish comparative plant genomics using unsaturated sequence collections.
by Rudd S.
Affliation: Centre for Biotechnology, Tykistökatu 6, FIN-20521 Turku, Finland.
Journal: Nucleic Acids Res. 33 Database Issue:D622-7
Publication Date: Monday, December 20, 2004
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GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts.
by Aubourg S, Brunaud V, Bruyère C, Cock M, Cooke R, Cottet A, Couloux A, Déhais P, Deléage G, Duclert A, Echeverria M, Eschbach A, Falconet D, Filippi G, Gaspin C, Geourjon C, Grienenberger JM, Houlné G, Jamet E, Lechauve F, Leleu O, Leroy P, Mache R, Meyer C, Nedjari H, Negrutiu I, Orsini V, Peyretaillade E, Pommier C, Raes J, Risler JL, Rivière S, Rombauts S, Rouzé P, Schneider M, Schwob P, Small I, Soumayet-Kampetenga G, Stankovski D, Toffano C, Tognolli M, Caboche M, Lecharny A.
Affliation: Unité de Recherche en Génomique Végétale (INRA/CNRS/UEVE) 2 Rue Gaston Crémieux, CP 5708, 91057 Evry Cedex, France. aubourg@evry.inra.fr
Journal: Nucleic Acids Res. 33 Database Issue:D641-6
Publication Date: Monday, December 20, 2004
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Biological applications of support vector machines.
by Yang ZR.
Affliation: Department of Computer Science, Exeter University, Prince of Wales Road, Exeter EX4 4PS, UK.
Journal: Brief Bioinform. 5(4):328-38
Publication Date: Monday, December 20, 2004
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A review of bioinformatics degrees in Australia.
by Cattley S.
Affliation: Australian National Genomic Information Service (ANGIS), Gunn Building (B19) University of Sydney, Camperdown, NSW 2006, Australia.
Journal: Brief Bioinform. 5(4):350-4
Publication Date: Monday, December 20, 2004
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Oracle Database 10g: a platform for BLAST search and Regular Expression pattern matching in life sciences.
by Stephens SM, Chen JY, Davidson MG, Thomas S, Trute BM.
Affliation: Oracle Corporation, 10 Van de Graaff Drive, Burlington, MA 01803, USA. susie.stephens@oracle.com
Journal: Nucleic Acids Res. 33 Database Issue:D675-9
Publication Date: Monday, December 20, 2004
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The made-in-Israel bioinformatics portal.
by Rosenberg Y, Unger R.
Affliation: Inter-University Computation Center, Tel Aviv University, Ramat-Aviv Tel-Aviv 69978, Israel and Faculty of Life Science, Bar Ilan University, Ramat-Gan 52900, Israel.
Journal: Brief Bioinform. 5(4):389-90
Publication Date: Monday, December 20, 2004
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