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Bioinformatics Journals and Computational Biology Journals


Bioinformatics Journals and Computational Biology Journals - May, 2004

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Computational analysis of Plasmodium falciparum metabolism: organizing genomic information to facilitate drug discovery.
by Yeh I, Hanekamp T, Tsoka S, Karp PD, Altman RB.
Affliation: Department of Genetics, Stanford University, Stanford, California 94305, USA.
Journal: Genome Res. 04 2004;14(5):917-24
Publication Date: Tuesday, May 04, 2004
PubMed citation

Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment.
by Dermitzakis ET, Kirkness E, Schwarz S, Birney E, Reymond A, Antonarakis SE.
Affliation: Division of Medical Genetics, University of Geneva Medical School, CH-1211 Geneva, Switzerland. Emmanouil.Dermitzakis@medecine.unige.ch
Journal: Genome Res. 04 2004;14(5):852-9
Publication Date: Tuesday, May 04, 2004
PubMed citation

An overview of Ensembl.
by Birney E, Andrews TD, Bevan P, Caccamo M, Chen Y, Clarke L, Coates G, Cuff J, Curwen V, Cutts T, Down T, Eyras E, Fernandez-Suarez XM, Gane P, Gibbins B, Gilbert J, Hammond M, Hotz HR, Iyer V, Jekosch K, Kahari A, Kasprzyk A, Keefe D, Keenan S, Lehvaslaiho H, McVicker G, Melsopp C, Meidl P, Mongin E, Pettett R, Potter S, Proctor G, Rae M, Searle S, Slater G, Smedley D, Smith J, Spooner W, Stabenau A, Stalker J, Storey R, Ureta-Vidal A, Woodwark KC, Cameron G, Durbin R, Cox A, Hubbard T, Clamp M
Affliation: EMBL European Bioinformatics Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK. birney@ebi.ac.uk
Journal: Genome Res. 04 2004;14(5):925-8
Publication Date: Tuesday, May 04, 2004
PubMed citation

Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice.
by Ma J, Devos KM, Bennetzen JL.
Affliation: Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907, USA.
Journal: Genome Res. 04 2004;14(5):860-9
Publication Date: Tuesday, May 04, 2004
PubMed citation

Utilization of the relative complexity measure to construct a phylogenetic tree for fungi.
by Bastola DR, Otu HH, Doukas SE, Sayood K, Hinrichs SH, Iwen PC.
Affliation: Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198-6495, USA.
Journal: Mycol Res. 108(Pt 2):117-25
Publication Date: Monday, May 03, 2004
PubMed citation

Malaria genome project and its impact on the disease.
by Verma P, Sharma YD.
Affliation: Department of Biotechnology, All India Institute of Medical Sciences, New Delhi, India.
Journal: J Vector Borne Dis. 2003 Mar-Jun;40(1-2):9-15
Publication Date: Monday, May 03, 2004
PubMed citation

Comparison of basal gene expression profiles and effects of hepatocarcinogens on gene expression in cultured primary human hepatocytes and HepG2 cells.
by Harris AJ, Dial SL, Casciano DA.
Affliation: Center for Hepatotoxicity, National Center for Toxicological Research, Food and Drug Administration, 3900 NCTR Drive, Jefferson, AR 72079, USA. aharris@cteh.com
Journal: Mutat Res. 549(1-2):79-99
Publication Date: Monday, May 03, 2004
PubMed citation



Development of public toxicogenomics software for microarray data management and analysis.
by Tong W, Harris S, Cao X, Fang H, Shi L, Sun H, Fuscoe J, Harris A, Hong H, Xie Q, Perkins R, Casciano D.
Affliation: Center for Toxicoinformatics, Division of Biometry and Risk Assessment, NCTR, 3900 NCTR Road, HFT-020, Jefferson, AR 72079, USA. wtong@nctr.fda.gov
Journal: Mutat Res. 549(1-2):241-53
Publication Date: Monday, May 03, 2004
PubMed citation

Pharmacogenetics of psychotropic drug response.
by Malhotra AK, Murphy GM, Kennedy JL.
Affliation: Department of Psychiatry Research, Zucker Hillside Hospital, 75-59 263rd St., Glen Oaks, NY 11004, USA. malhotra@lij.edu
Journal: Am J Psychiatry. 161(5):780-96
Publication Date: Monday, May 03, 2004
PubMed citation

Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae.
by Kolker E, Makarova KS, Shabalina S, Picone AF, Purvine S, Holzman T, Cherny T, Armbruster D, Munson RS, Kolesov G, Frishman D, Galperin MY.
Affliation: BIATECH, 19310 North Creek Parkway, Suite 115, Bothell, WA 98011, USA. ekolker@biatech.org
Journal: Nucleic Acids Res. 04 2004;32(8):2353-61
Publication Date: Monday, May 03, 2004
PubMed citation

Bioinformatics attracts big guns.
by Mitchell P.
Affliation:
Journal: Nat Biotechnol. 22(5):492-3
Publication Date: Monday, May 03, 2004
PubMed citation

Structure-aided drug design's next generation.
by Thiel KA.
Affliation: kthiel@qwest.net
Journal: Nat Biotechnol. 22(5):513-9
Publication Date: Monday, May 03, 2004
PubMed citation

Microarray reality checks in the context of a complex disease.
by Miklos GL, Maleszka R.
Affliation: Secure Genetics, 81 Bynya Road, Palm Beach, Sydney, NSW, Australia. gmiklos@securegenetics.com
Journal: Nat Biotechnol. 22(5):615-21
Publication Date: Monday, May 03, 2004
PubMed citation

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