trome, trEST and trGEN: databases of predicted protein sequences.
by Sperisen P, Iseli C, Pagni M, Stevenson BJ, Bucher P, Jongeneel CV.
Affliation: Swiss Institute of Bioinformatics, Ludwig Institute for Cancer Research, Chemin des Boveresses 155, 1066 Epalinges s/Lausanne, Switzerland. peter.sperisen@isb-sib.ch
Journal: Nucleic Acids Res. 32 Database issue:D509-11
Publication Date: Thursday, December 18, 2003
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Pathbase: a database of mutant mouse pathology.
by Schofield PN, Bard JB, Booth C, Boniver J, Covelli V, Delvenne P, Ellender M, Engstrom W, Goessner W, Gruenberger M, Hoefler H, Hopewell J, Mancuso M, Mothersill C, Potten CS, Quintanilla-Fend L, Rozell B, Sariola H, Sundberg JP, Ward A.
Affliation: Department of Anatomy, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK. ps@mole.bio.cam.ac.uk
Journal: Nucleic Acids Res. 32 Database issue:D512-5
Publication Date: Thursday, December 18, 2003
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HGVbase: a curated resource describing human DNA variation and phenotype relationships.
by Fredman D, Munns G, Rios D, Sjöholm F, Siegfried M, Lenhard B, Lehväslaiho H, Brookes AJ.
Affliation: Center for Genomics and Bioinformatics, Karolinska Institute, Berzelius väg 35, S-171 77 Stockholm, Sweden.
Journal: Nucleic Acids Res. 32 Database issue:D516-9
Publication Date: Thursday, December 18, 2003
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topoSNP: a topographic database of non-synonymous single nucleotide polymorphisms with and without known disease association.
by Stitziel NO, Binkowski TA, Tseng YY, Kasif S, Liang J.
Affliation: Department of Bioengineering, University of Illinois at Chicago, M/C 063, 851 S. Morgan Street, Chicago, IL 60607, USA.
Journal: Nucleic Acids Res. 32 Database issue:D520-2
Publication Date: Thursday, December 18, 2003
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ArchDB: automated protein loop classification as a tool for structural genomics.
by Espadaler J, Fernandez-Fuentes N, Hermoso A, Querol E, Aviles FX, Sternberg MJ, Oliva B.
Affliation: Institut de Biotecnologia i de Biomedicina and Departament de Bioquímica, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain.
Journal: Nucleic Acids Res. 32 Database issue:D185-8
Publication Date: Thursday, December 18, 2003
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The ASTRAL Compendium in 2004.
by Chandonia JM, Hon G, Walker NS, Lo Conte L, Koehl P, Levitt M, Brenner SE.
Affliation: Berkeley Structural Genomics Center, Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Journal: Nucleic Acids Res. 32 Database issue:D189-92
Publication Date: Thursday, December 18, 2003
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RTCGD: retroviral tagged cancer gene database.
by Akagi K, Suzuki T, Stephens RM, Jenkins NA, Copeland NG.
Affliation: Mouse Cancer Genetics Program, National Cancer Institute, Frederick, MD 21701, USA.
Journal: Nucleic Acids Res. 32 Database issue:D523-7
Publication Date: Thursday, December 18, 2003
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Development of a porcine brain cDNA library, EST database, and microarray resource.
by Nobis W, Ren X, Suchyta SP, Suchyta TR, Zanella AJ, Coussens PM.
Affliation: Center for Animal Functional Genomics, Michigan State University, East Lansing, Michigan 48824, USA.
Journal: Physiol Genomics. 12 2003;16(1):153-9
Publication Date: Wednesday, December 17, 2003
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In silico multicellular systems biology and minimal genomes.
by Werner E.
Affliation: Cellnomica PO Box 1422 Fort Myers, FL 33928-1422, USA. eric.werner@cellnomica.com
Journal: Drug Discov Today. 8(24):1121-7
Publication Date: Wednesday, December 17, 2003
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Evaluation of common gene expression patterns in the rat nervous system.
by Kaiser S, Nisenbaum LK.
Affliation: Neuroscience Discovery Research, Lilly Research Laboratories, Eli Lilly and Company, Indianapolis, Indiana 46285-0438, USA.
Journal: Physiol Genomics. 12 2003;16(1):1-7
Publication Date: Wednesday, December 17, 2003
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Widespread production of novel soluble protein isoforms by alternative splicing removal of transmembrane anchoring domains.
by Xing Y, Xu Q, Lee C.
Affliation: Molecular Biology Institute, UCLA Institute for Genomics and Proteomics, Department of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, CA 90095-1570, USA.
Journal: FEBS Lett. 555(3):572-8
Publication Date: Tuesday, December 16, 2003
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Proteomics: techniques and applications in cancer research.
by Schramm A, Apostolov O, Sitek B, Pfeiffer K, Stühler K, Meyer HE, Havers W, Eggert A.
Affliation: University Children's Hospital of Essen, Germany.
Journal: Klin Padiatr. 2003 Nov-Dec;215(6):293-7
Publication Date: Tuesday, December 16, 2003
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P for probability and p for p53.
by Rees J.
Affliation: Department of Dermatology, University of Edinburgh, Edinburgh, UK.
Journal: J Invest Dermatol. 121(6):xii-xiii
Publication Date: Tuesday, December 16, 2003
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A complete set of SNAREs in yeast.
by Burri L, Lithgow T.
Affliation: Russell Grimwade School of Biochemistry & Molecular Biology, University of Melbourne, Parkville 3010, Australia.
Journal: Traffic. 5(1):45-52
Publication Date: Tuesday, December 16, 2003
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Evolving strategies for the incorporation of bioinformatics within the undergraduate cell biology curriculum.
by Honts JE.
Affliation: Department of Biology, Drake University, 2507 University Avenue, Des Moines, Iowa 50325, USA. jerry.honts@drake.edu
Journal: Cell Biol Educ. 2003 Winter;2(4):233-47
Publication Date: Monday, December 15, 2003
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Efficiency improvement of peptide identification for an organism without complete genome sequence, using expressed sequence tag database and tandem mass spectral data.
by Kwon KH, Kim M, Kim JY, Kim KW, Kim SI, Park YM, Yoo JS.
Affliation: Korea Basic Science Institute, 52 Yeo-Eun Dong, Yusung-gu, Daejeon 305-333, Korea.
Journal: Proteomics. 3(12):2305-9
Publication Date: Monday, December 15, 2003
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A new horizon of proteomics in Korea.
by Paik YK.
Affliation:
Journal: Proteomics. 3(12):NA
Publication Date: Monday, December 15, 2003
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[Cloning and characterization of a novel cardiac-specific kinase gene p93 related to sarcomere]
by Meng XM, Zhao Y, Wei YJ, Cao HQ, Zhao XW, Liu DQ, Shi N, Ding JF.
Affliation: Molecular Medicine Center, Cardiovascular Institute Fuwai Hospital, Chinese Academy of Medical Sciences Peking Union Medical College, Beijing 100037, China. xmmengcn@yahoo.com
Journal: Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 35(12):1083-9
Publication Date: Monday, December 15, 2003
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[A method for delineation of domains in proteins based on refolding free energy--application to continuous and discontinuous domains]
by Xie ZQ, Xu GJ.
Affliation: Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, the Chinese Academy of Sciences, Shanghai 200031, China.
Journal: Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 35(12):1090-8
Publication Date: Monday, December 15, 2003
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Statistical issues and methods for meta-analysis of microarray data: a case study in prostate cancer.
by Ghosh D, Barette TR, Rhodes D, Chinnaiyan AM.
Affliation: Department of Biostatistics, School of Public Health, University of Michigan, 1420 Washington Heights, Ann Arbor, MI 48109-2029, USA. ghoshd@umich.edu
Journal: Funct Integr Genomics. 07 2003;3(4):180-8
Publication Date: Monday, December 15, 2003
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