MolliGen, a database dedicated to the comparative genomics of Mollicutes.
by Barré A, de Daruvar A, Blanchard A.
Affliation: INRA-Université de Bordeaux 2, IBVM, Bordeaux, France.
Journal: Nucleic Acids Res. 32 Database issue:D307-10
Publication Date: Thursday, December 18, 2003
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MIPS: analysis and annotation of proteins from whole genomes.
by Mewes HW, Amid C, Arnold R, Frishman D, Güldener U, Mannhaupt G, Münsterkötter M, Pagel P, Strack N, Stümpflen V, Warfsmann J, Ruepp A.
Affliation: Institute for Bioinformatics (MIPS), GSF National Research Center for Environment and Health, Ingolstaedter Landstrasse 1, D-85764 Neuherberg, Germany. w.mewes@gsf.de
Journal: Nucleic Acids Res. 32 Database issue:D41-4
Publication Date: Thursday, December 18, 2003
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Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.
by Christie KR, Weng S, Balakrishnan R, Costanzo MC, Dolinski K, Dwight SS, Engel SR, Feierbach B, Fisk DG, Hirschman JE, Hong EL, Issel-Tarver L, Nash R, Sethuraman A, Starr B, Theesfeld CL, Andrada R, Binkley G, Dong Q, Lane C, Schroeder M, Botstein D, Cherry JM.
Affliation: Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305-5120, USA.
Journal: Nucleic Acids Res. 32 Database issue:D311-4
Publication Date: Thursday, December 18, 2003
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ACLAME: a CLAssification of Mobile genetic Elements.
by Leplae R, Hebrant A, Wodak SJ, Toussaint A.
Affliation: Service de Conformation de Macromolécules Biologiques et de Bioinformatique, Université Libre de Bruxelles, Belgium. raphael@scmbb.ulb.ac.be
Journal: Nucleic Acids Res. 32 Database issue:D45-9
Publication Date: Thursday, December 18, 2003
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yMGV: a cross-species expression data mining tool.
by Lelandais G, Le Crom S, Devaux F, Vialette S, Church GM, Jacq C, Marc P.
Affliation: Laboratoire de Génétique Moléculaire, CNRS UMR8541, Ecole Normale Supérieure, Paris, France.
Journal: Nucleic Acids Res. 32 Database issue:D323-5
Publication Date: Thursday, December 18, 2003
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ApiEST-DB: analyzing clustered EST data of the apicomplexan parasites.
by Li L, Crabtree J, Fischer S, Pinney D, Stoeckert CJ, Sibley LD, Roos DS.
Affliation: Department of Biology, Center for Bioinformatics, University of Pennsylvania, Philadelphia, PA 19104, USA.
Journal: Nucleic Acids Res. 32 Database issue:D326-8
Publication Date: Thursday, December 18, 2003
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HERVd: the Human Endogenous RetroViruses Database: update.
by Paces J, Pavlícek A, Zika R, Kapitonov VV, Jurka J, Paces V.
Affliation: Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Flemingovo 2, CZ-16637 Prague, Czech Republic.
Journal: Nucleic Acids Res. 32 Database issue:D50
Publication Date: Thursday, December 18, 2003
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IMGT/GeneInfo: enhancing V(D)J recombination database accessibility.
by Baum TP, Pasqual N, Thuderoz F, Hierle V, Chaume D, Lefranc MP, Jouvin-Marche E, Marche PN, Demongeot J.
Affliation: Laboratoire TIMC-IMAG-CNRS UMR 5525, Techniques de l'Imagerie, de la Modélisation et de la Cognition, Université Joseph Fourier, Grenoble 1, Faculté de Médecine, Domaine de la Merci, 38706 La Tronche, France. tpbaum@imag.fr
Journal: Nucleic Acids Res. 32 Database issue:D51-4
Publication Date: Thursday, December 18, 2003
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CryptoDB: the Cryptosporidium genome resource.
by Puiu D, Enomoto S, Buck GA, Abrahamsen MS, Kissinger JC.
Affliation: Center for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, USA.
Journal: Nucleic Acids Res. 32 Database issue:D329-31
Publication Date: Thursday, December 18, 2003
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dictyBase: a new Dictyostelium discoideum genome database.
by Kreppel L, Fey P, Gaudet P, Just E, Kibbe WA, Chisholm RL, Kimmel AR.
Affliation: Laboratory of Cellular and Developmental Biology (50/3351), National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892-8028, USA.
Journal: Nucleic Acids Res. 32 Database issue:D332-3
Publication Date: Thursday, December 18, 2003
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Full-malaria 2004: an enlarged database for comparative studies of full-length cDNAs of malaria parasites, Plasmodium species.
by Watanabe J, Suzuki Y, Sasaki M, Sugano S.
Affliation: Department of Parasitology, Human Genome Center, Institute of Medical Science, The University of Tokyo, 4-6-1, Shirokanedai, Minatoku, Tokyo 108-8639, Japan. jwatanab@ims.u-tokyo.ac.jp
Journal: Nucleic Acids Res. 32 Database issue:D334-8
Publication Date: Thursday, December 18, 2003
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Islander: a database of integrative islands in prokaryotic genomes, the associated integrases and their DNA site specificities.
by Mantri Y, Williams KP.
Affliation: Department of Biology, Indiana University, 1001 E. Third Street, Bloomington, IN 47405, USA.
Journal: Nucleic Acids Res. 32 Database issue:D55-8
Publication Date: Thursday, December 18, 2003
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Xpro: database of eukaryotic protein-encoding genes.
by Gopalan V, Tan TW, Lee BT, Ranganathan S.
Affliation: Department of Biochemistry, National University of Singapore, Singapore 119260.
Journal: Nucleic Acids Res. 32 Database issue:D59-63
Publication Date: Thursday, December 18, 2003
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GeneDB: a resource for prokaryotic and eukaryotic organisms.
by Hertz-Fowler C, Peacock CS, Wood V, Aslett M, Kerhornou A, Mooney P, Tivey A, Berriman M, Hall N, Rutherford K, Parkhill J, Ivens AC, Rajandream MA, Barrell B.
Affliation: The Wellcome Trust Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK. chf@sanger.ac.uk
Journal: Nucleic Acids Res. 32 Database issue:D339-43
Publication Date: Thursday, December 18, 2003
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TcruziDB: an integrated Trypanosoma cruzi genome resource.
by Luchtan M, Warade C, Weatherly DB, Degrave WM, Tarleton RL, Kissinger JC.
Affliation: Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA 30602-2606, USA.
Journal: Nucleic Acids Res. 32 Database issue:D344-6
Publication Date: Thursday, December 18, 2003
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FLAGdb++: a database for the functional analysis of the Arabidopsis genome.
by Samson F, Brunaud V, Duchêne S, De Oliveira Y, Caboche M, Lecharny A, Aubourg S.
Affliation: Unité de Recherche en Génomique Végétale (URGV), UMR INRA 1165, CNRS 8114, Université d'Evry Val d'Essonne, 2 rue Gaston Crémieux, CP 5708, F-91057 Evry Cedex, France.
Journal: Nucleic Acids Res. 32 Database issue:D347-50
Publication Date: Thursday, December 18, 2003
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ASD: the Alternative Splicing Database.
by Thanaraj TA, Stamm S, Clark F, Riethoven JJ, Le Texier V, Muilu J.
Affliation: European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. thanaraj@ebi.ac.uk
Journal: Nucleic Acids Res. 32 Database issue:D64-9
Publication Date: Thursday, December 18, 2003
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EASED: Extended Alternatively Spliced EST Database.
by Pospisil H, Herrmann A, Bortfeldt RH, Reich JG.
Affliation: Max-Delbrück-Center for Molecular Medicine, Department of Bioinformatics, Robert-Rössle-Strasse 10, 13125 Berlin, Germany. pospisil@mdc-berlin.de
Journal: Nucleic Acids Res. 32 Database issue:D70-4
Publication Date: Thursday, December 18, 2003
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PHYTOPROT: a database of clusters of plant proteins.
by Mohseni-Zadeh S, Louis A, Brézellec P, Risler JL.
Affliation: Laboratoire G?énome et Informatique, UMR 8116 and Infobiogen, Tour Evry 2, 523 Place des Terrasses, 91034 Evry Cedex, France.
Journal: Nucleic Acids Res. 32 Database issue:D351-3
Publication Date: Thursday, December 18, 2003
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PlantGDB, plant genome database and analysis tools.
by Dong Q, Schlueter SD, Brendel V.
Affliation: Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011-3260, USA.
Journal: Nucleic Acids Res. 32 Database issue:D354-9
Publication Date: Thursday, December 18, 2003
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