The next step in systems biology: simulating the temporospatial dynamics of molecular network.
by Zhu H, Huang S, Dhar P.
Affliation: Bioinformatics Institute of Singapore, Singapore.
Journal: Bioessays. 26(1):68-72
Publication Date: Monday, December 29, 2003
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Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era.
by Kell DB, Oliver SG.
Affliation: Department of Chemistry, UMIST, Manchester, UK. dbk@umist.ac.uk
Journal: Bioessays. 26(1):99-105
Publication Date: Monday, December 29, 2003
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Sequence and structural analysis of cellular retinoic acid-binding proteins reveals a network of conserved hydrophobic interactions.
by Gunasekaran K, Hagler AT, Gierasch LM.
Affliation: Department of Biochemistry, University of Massachusetts, Amherst 01003, USA.
Journal: Proteins. 54(2):179-94
Publication Date: Monday, December 29, 2003
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Evaluation of protein fold comparison servers.
by Novotny M, Madsen D, Kleywegt GJ.
Affliation: Department of Cell and Molecular Biology, Uppsala University, Biomedical Centre, Uppsala, Sweden.
Journal: Proteins. 54(2):260-70
Publication Date: Monday, December 29, 2003
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Amplification and overexpression of the IGF2 regulator PLAG1 in hepatoblastoma.
by Zatkova A, Rouillard JM, Hartmann W, Lamb BJ, Kuick R, Eckart M, von Schweinitz D, Koch A, Fonatsch C, Pietsch T, Hanash SM, Wimmer K.
Affliation: Institut für Medizinische Biologie, Universität Wien, Vienna, Austria.
Journal: Genes Chromosomes Cancer. 39(2):126-37
Publication Date: Monday, December 29, 2003
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Effective scoring function for protein sequence design.
by Liang S, Grishin NV.
Affliation: Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas 75390-9050, USA.
Journal: Proteins. 54(2):271-81
Publication Date: Monday, December 29, 2003
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Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteins.
by Kuhn M, Meiler J, Baker D.
Affliation: California Institute of Technology, Pasadena, USA.
Journal: Proteins. 54(2):282-8
Publication Date: Monday, December 29, 2003
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ProVal: a protein-scoring function for the selection of native and near-native folds.
by Berglund A, Head RD, Welsh EA, Marshall GR.
Affliation: Center for Computational Biology, Washington University Medical School, St. Louis, Missouri 63110, USA.
Journal: Proteins. 54(2):289-302
Publication Date: Monday, December 29, 2003
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WILMA-automated annotation of protein sequences.
by Prlic A, Domingues FS, Lackner P, Sippl MJ.
Affliation: Center of Applied Molecular Engineering, Institute for Chemistry and Biochemistry, University of Salzburg, Jakob-Haringerstr. 5, A-5020 Salzburg, Austria.
Journal: Bioinformatics. 20(1):127-8
Publication Date: Wednesday, December 24, 2003
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Toxicogenomics in drug development.
by Guerreiro N, Staedtler F, Grenet O, Kehren J, Chibout SD.
Affliation: Novartis Pharma AG, Pharmacogenomics, Preclinical Safety, Basel, Switzerland. nelson.guerreiro@pharma.novartis.com
Journal: Toxicol Pathol. 2003 Sep-Oct;31(5):471-9
Publication Date: Wednesday, December 24, 2003
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Light-weight integration of molecular biological databases.
by Philippi S.
Affliation: Department of Computer Science, University of Koblenz, P.O. Box 201 106, 56016 Koblenz, Germany. philippi@uni-koblenz.de
Journal: Bioinformatics. 20(1):51-7
Publication Date: Wednesday, December 24, 2003
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VizStruct: exploratory visualization for gene expression profiling.
by Zhang L, Zhang A, Ramanathan M.
Affliation: Department of Computer Science and Engineering, State University of New York at Buffalo, Buffalo, NY 14260, USA. lizhang@cse.buffalo.edu
Journal: Bioinformatics. 20(1):85-92
Publication Date: Wednesday, December 24, 2003
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Genetic analysis of psychiatric disorders associated with human chromosome 18.
by Kamnasaran D.
Affliation: The Arthur and Sonia Labatts Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, Ont. dkamnasa@sickkids.ca
Journal: Clin Invest Med. 26(6):285-302
Publication Date: Tuesday, December 23, 2003
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Functional Genomics: all the king's horses and all the king's men can put Humpty together again.
by Oliver S.
Affliation: School of Biological Sciences, University of Manchester, 2.205 Stopford Building, Oxford Road, Manchester M13 9PT, United Kingdom.
Journal: Mol Cell. 12(6):1343-4
Publication Date: Tuesday, December 23, 2003
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Assigning function to yeast proteins by integration of technologies.
by Hazbun TR, Malmström L, Anderson S, Graczyk BJ, Fox B, Riffle M, Sundin BA, Aranda JD, McDonald WH, Chiu CH, Snydsman BE, Bradley P, Muller EG, Fields S, Baker D, Yates JR, Davis TN.
Affliation: Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.
Journal: Mol Cell. 12(6):1353-65
Publication Date: Tuesday, December 23, 2003
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Variability-based sequence alignment identifies residues responsible for functional differences in alpha and beta tubulin.
by Fygenson DK, Needleman DJ, Sneppen K.
Affliation: Physics Department, University of California, Santa Barbara, California 93106, USA.
Journal: Protein Sci. 13(1):25-31
Publication Date: Tuesday, December 23, 2003
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PFIT and PFRIT: bioinformatic algorithms for detecting glycosidase function from structure and sequence.
by Kleiger G, Panina EM, Mallick P, Eisenberg D.
Affliation: Howard Hughes Medical Institute, University of California, Los Angeles-Department Of Energy, Institute of Genomics and Proteomics, UCLA, Los Angeles, California 90095, USA.
Journal: Protein Sci. 13(1):221-9
Publication Date: Tuesday, December 23, 2003
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Informatics and the immune system: the expanding IL-1 and B7 protein families.
by Grant EP, Coyle AJ, Gutierrez-Ramos JC.
Affliation: Millennium Pharmaceuticals, Inc., 35 Landsdowne Street, Cambridge, MA 02139, USA. egrant@mpi.com
Journal: Semin Immunol. 15(4):225-31
Publication Date: Tuesday, December 23, 2003
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Exploring the immunogenome with bioinformatics.
by de Bono B, Trowsdale J.
Affliation: MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK. bdb@mrc-lmb.cam.ac.uk
Journal: Semin Immunol. 15(4):233-8
Publication Date: Tuesday, December 23, 2003
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Mapping of ESTs derived from pre-implantation stage cattle embryos to allocate 16 new additions to the ordered comparative map of cattle and human.
by Mamo S, Wimmers K, Gilles M, Kata SR, Schellander K, Ponsuksili S.
Affliation: Institute of Animal Breeding Sciences, University of Bonn, Bonn, Germany. lilykacha@hotmail.com
Journal: Anim Genet. 34(6):449-52
Publication Date: Monday, December 22, 2003
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