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Bioinformatics Journals and Computational Biology Journals


Bioinformatics Journals and Computational Biology Journals - November, 2003

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Early bioinformatics: the birth of a discipline--a personal view.
by Ouzounis CA, Valencia A.
Affliation: Computational Genomics Group, The European Bioinformatics Institute, EMBL Cambridge Outstation, Cambridge CB10 1SD, UK. ouzounis@ebi.ac.uk
Journal: Bioinformatics. 19(17):2176-90
Publication Date: Friday, November 21, 2003
PubMed citation

MASV--Multiple (BLAST) Annotation System Viewer.
by Carter K, Bellgard M.
Affliation: Centre for Bioinformatics and Biological Computing, School of Information Technology, Murdoch University, Murdoch 6150, WA, Australia. kcarter@cbbc.murdoch.edu.au
Journal: Bioinformatics. 19(17):2313-5
Publication Date: Friday, November 21, 2003
PubMed citation

Systems biology in neuroscience: bridging genes to cognition.
by Grant SG.
Affliation: Division of Neuroscience, 1 George Square, Edinburgh EH8 9JZ, UK. seth.grant@ed.ac.uk
Journal: Curr Opin Neurobiol. 13(5):577-82
Publication Date: Friday, November 21, 2003
PubMed citation

NanoSystems biology.
by Heath JR, Phelps ME, Hood L.
Affliation: Department of Chemistry, California Institute of Technology, Pasadena, CA 91125, USA. heath@caltech.edu
Journal: Mol Imaging Biol. 2003 Sep-Oct;5(5):312-25
Publication Date: Friday, November 21, 2003
PubMed citation

Evolutionary Local Search of Fuzzy Rules through a novel Neuro-Fuzzy encoding method.
by Carrascal A, Manrique D, Ríos J, Rossi C.
Affliation: Departamento de Inteligencia Artificial, Facultad de Informática, Universidad Politécnica de Madrid, 28660 Boadilla del Monte, Madrid, Spain. aacarrascal@legazpi.dia.fi.upm.es
Journal: Evol Comput. 2003 Winter;11(4):439-61
Publication Date: Friday, November 21, 2003
PubMed citation

Normal mode analysis of proteins: a comparison of rigid cluster modes with C(alpha) coarse graining.
by Schuyler AD, Chirikjian GS.
Affliation: Department of Mechanical Engineering, The Johns Hopkins University, Baltimore, MD 21218, USA.
Journal: J Mol Graph Model. 22(3):183-93
Publication Date: Friday, November 21, 2003
PubMed citation

Application of genomics and proteomics in Type 1 diabetes pathogenesis research.
by Sparre T, Bergholdt R, Nerup J, Pociot F.
Affliation: Steno Diabetes Center, Gentofte, Denmark. tspa@steno.dk
Journal: Expert Rev Mol Diagn. 3(6):743-57
Publication Date: Friday, November 21, 2003
PubMed citation

Redundant representations in evolutionary computation.
by Rothlauf F, Goldberg DE.
Affliation: Department of Information Systems 1, University of Mannheim, Schloss, D-68131 Mannheim, Germany. rothlauf@uni-mannheim.de
Journal: Evol Comput. 2003 Winter;11(4):381-415
Publication Date: Friday, November 21, 2003
PubMed citation

GeneHuggers: database mining and application connectivity tools for subsequence analyses of the human genome.
by Iacovoni JS.
Affliation: Department of Molecular and Experimental Medicine, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA. jiaco@scripps.edu
Journal: Bioinformatics. 19(17):2316-8
Publication Date: Friday, November 21, 2003
PubMed citation

BioWareDB: the biomedical software and database search engine.
by Matthiessen MW.
Affliation: Department of Medical Gastroenterology (54O3), Herlev University Hospital, Herlev Ringvej 75, 2730 Herlev, Denmark. biocomp@madswichmann.dk
Journal: Bioinformatics. 19(17):2319-20
Publication Date: Friday, November 21, 2003
PubMed citation

Proteomics. Public projects gear up to chart the protein landscape.
by Service RF.
Affliation:
Journal: Science. 302(5649):1316-8
Publication Date: Friday, November 21, 2003
PubMed citation



Structural biology. Learning to speak the language of proteins.
by Jones DT.
Affliation: Department of Computer Science and Department of Biochemistry and Molecular Biology, University College, London WC1E 6BT, UK. dtj@cs.ucl.ac.uk
Journal: Science. 302(5649):1347-8
Publication Date: Friday, November 21, 2003
PubMed citation

Design of a novel globular protein fold with atomic-level accuracy.
by Kuhlman B, Dantas G, Ireton GC, Varani G, Stoddard BL, Baker D.
Affliation: Department of Biochemistry, University of Washington, Seattle, WA 98195, USA.
Journal: Science. 302(5649):1364-8
Publication Date: Friday, November 21, 2003
PubMed citation

Exploring the sequence patterns in the alpha-helices of proteins.
by Wang J, Feng JA.
Affliation: Department of Chemistry and Center for Biotechnology, Temple University, 1901 North 13th Street, Philadelphia, PA 19122, USA.
Journal: Protein Eng. 16(11):799-807
Publication Date: Friday, November 21, 2003
PubMed citation

Molecular cloning and characterization of a novel human kinase gene, PDIK1L.
by Guo L, Ji C, Gu S, Ying K, Cheng H, Ni X, Liu J, Xie Y, Mao Y.
Affliation: State Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Sciences, Fudan University, Shanghai 200433, People's Republic of China.
Journal: J Genet. 2003 Apr-Aug;82(1-2):27-32
Publication Date: Friday, November 21, 2003
PubMed citation

Developing integrative computational models of pulmonary structure.
by Tawhai MH, Burrowes KS.
Affliation: Bioengineering Institute, The University of Auckland, New Zealand. m.tawhai@auckland.ac.nz
Journal: Anat Rec. 275B(1):207-18
Publication Date: Thursday, November 20, 2003
PubMed citation

Computational identification of the Spo0A-phosphate regulon that is essential for the cellular differentiation and development in Gram-positive spore-forming bacteria.
by Liu J, Tan K, Stormo GD.
Affliation: Department of Genetics, Washington University Medical School, St Louis, MO 63110, USA.
Journal: Nucleic Acids Res. 31(23):6891-903
Publication Date: Thursday, November 20, 2003
PubMed citation

Mastering seeds for genomic size nucleotide BLAST searches.
by Gotea V, Veeramachaneni V, Makalowski W.
Affliation: Institute of Molecular Evolutionary Genetics and Department of Biology, The Pennsylvania State University, 514 Mueller Lab, University Park, PA 16802, USA.
Journal: Nucleic Acids Res. 31(23):6935-41
Publication Date: Thursday, November 20, 2003
PubMed citation

Improving gene annotation of complete viral genomes.
by Mills R, Rozanov M, Lomsadze A, Tatusova T, Borodovsky M.
Affliation: School of Biology, Georgia Institute of Technology, Atlanta, GA 30332-0230, USA.
Journal: Nucleic Acids Res. 31(23):7041-55
Publication Date: Thursday, November 20, 2003
PubMed citation

Hierarchical analysis of large-scale two-dimensional gel electrophoresis experiments.
by Rubinfeld A, Keren-Lehrer T, Hadas G, Smilansky Z.
Affliation: Compugen Ltd., Tel Aviv, Israel. amit.rubinfeld@cgen.com
Journal: Proteomics. 3(10):1930-5
Publication Date: Wednesday, November 19, 2003
PubMed citation

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