Discovery in silico and characterization in vitro of novel genes exclusively expressed in the mouse epididymis.
by Penttinen J, Pujianto DA, Sipila P, Huhtaniemi I, Poutanen M.
Affliation: Department of Physiology, Institute of Biomedicine, University of Turku, Kiinamyllynkatu 10, FIN-20520 Turku, Finland. matti.poutanen@utu.fi.
Journal: Mol Endocrinol. 08 2003;17(11):2138-51
Publication Date: Friday, October 31, 2003
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Computational neuroanatomy in sleep-disordered breathing and related disorders.
by Thomas RJ, Kwong K.
Affliation:
Journal: Sleep Med. 4(5):379-80
Publication Date: Friday, October 31, 2003
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Molecular cloning of a novel human gene encoding histone acetyltransferase-like protein involved in transcriptional activation of hTERT.
by Lv J, Liu H, Wang Q, Tang Z, Hou L, Zhang B.
Affliation: Department of Pathology, Health Science Center of Peking University, 38 Xueyuan road, Haidian district, Beijing 100083, China.
Journal: Biochem Biophys Res Commun. 311(2):506-13
Publication Date: Friday, October 31, 2003
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Genetic and phylogenetic characterization of the type II cyclobutane pyrimidine dimer photolyases encoded by Leporipoxviruses.
by Bennett CJ, Webb M, Willer DO, Evans DH.
Affliation: Department of Molecular Biology and Genetics, The University of Guelph, Guelph, Ontario, N1G 2W1, Canada.
Journal: Virology. 315(1):10-9
Publication Date: Friday, October 31, 2003
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Empirical analysis of transcriptional activity in the Arabidopsis genome.
by Yamada K, Lim J, Dale JM, Chen H, Shinn P, Palm CJ, Southwick AM, Wu HC, Kim C, Nguyen M, Pham P, Cheuk R, Karlin-Newmann G, Liu SX, Lam B, Sakano H, Wu T, Yu G, Miranda M, Quach HL, Tripp M, Chang CH, Lee JM, Toriumi M, Chan MM, Tang CC, Onodera CS, Deng JM, Akiyama K, Ansari Y, Arakawa T, Banh J, Banno F, Bowser L, Brooks S, Carninci P, Chao Q, Choy N, Enju A, Goldsmith AD, Gurjal M, Hansen NF, Hayashizaki Y, Johnson-Hopson C, Hsuan VW, Iida K, Karnes M, Khan S, Koesema E, Ishida J, Jiang PX,
Affliation: Plant Gene Expression Center, Albany, CA 94710, USA.
Journal: Science. 302(5646):842-6
Publication Date: Friday, October 31, 2003
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Retrovirus-mediated gene transfer and expression cloning: powerful tools in functional genomics.
by Kitamura T, Koshino Y, Shibata F, Oki T, Nakajima H, Nosaka T, Kumagai H.
Affliation: Divisions of Cellular Therapy and Hematopoietic Factors, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan. kitamura@ims.u-tokyo.ac.jp
Journal: Exp Hematol. 31(11):1007-14
Publication Date: Thursday, October 30, 2003
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Bioinformatic analysis of functional differences between the immunoproteasome and the constitutive proteasome.
by Kesmir C, van Noort V, de Boer RJ, Hogeweg P.
Affliation: Theoretical Biology/Bioinformatics, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. C.Kesmir@bio.uu.nl
Journal: Immunogenetics. 08 2003;55(7):437-49
Publication Date: Thursday, October 30, 2003
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Fugu rubripes possesses genes for the entire set of the ITAM-bearing transmembrane signal subunits.
by Guselnikov SV, Najakshin AM, Taranin AV.
Affliation: Laboratory of Immunogenetics, Institute of Cytology and Genetics, Lavrentjev St. 10, Novosibirsk 630090, Russia.
Journal: Immunogenetics. 08 2003;55(7):472-9
Publication Date: Thursday, October 30, 2003
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Position specific variation in the rate of evolution in transcription factor binding sites.
by Moses AM, Chiang DY, Kellis M, Lander ES, Eisen MB.
Affliation: Graduate Group in Biophysics, University of California, Berkeley, CA 94720, USA. amoses@lbl.gov
Journal: BMC Evol Biol. 08 2003;3(1):19
Publication Date: Wednesday, October 29, 2003
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Comparison of mode estimation methods and application in molecular clock analysis.
by Hedges SB, Shah P.
Affliation: NASA Astrobiology Institute and Department of Biology, Pennsylvania State University, 208 Mueller Laboratory, University Park, PA 16802-5301, U,S,A. sbh1@psu.edu
Journal: BMC Bioinformatics. 07 2003;4(1):31
Publication Date: Wednesday, October 29, 2003
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Probabilistic estimation of microarray data reliability and underlying gene expression.
by Bilke S, Breslin T, Sigvardsson M.
Affliation: Complex Systems Division, Department of Theoretical Physics, University of Lund, Sölvegatan 14A, SE-223 62 Lund, Sweden. sven@thep.lu.se
Journal: BMC Bioinformatics. 09 2003;4(1):40
Publication Date: Wednesday, October 29, 2003
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MatGAT: an application that generates similarity/identity matrices using protein or DNA sequences.
by Campanella JJ, Bitincka L, Smalley J.
Affliation: Montclair State University, Department of Biology and Molecular Biology, 1 Normal Avenue, Montclair, New Jersey 07043 USA. james.campanella@montclair.edu
Journal: BMC Bioinformatics. 07 2003;4(1):29
Publication Date: Wednesday, October 29, 2003
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Cluster stability scores for microarray data in cancer studies.
by Smolkin M, Ghosh D.
Affliation: Department of Biostatistics, University of Michigan, Ann Arbor, Michigan, USA. Marksmolkin@hotmail.com
Journal: BMC Bioinformatics. 09 2003;4(1):36
Publication Date: Wednesday, October 29, 2003
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Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals.
by Prag S, Adams JC.
Affliation: Dept of Cell Biology, Lerner Research Institute, Cleveland Clinic Foundation, 9500 Euclid Avenue, Cleveland, Ohio 44195, USA. sprag@tiscali.co.uk
Journal: BMC Bioinformatics. 09 2003;4(1):42
Publication Date: Wednesday, October 29, 2003
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ELISA: structure-function inferences based on statistically significant and evolutionarily inspired observations.
by Shakhnovich BE, Harvey JM, Comeau S, Lorenz D, DeLisi C, Shakhnovich E.
Affliation: BioInformatics Program, Boston University, Boston, MA, 02215, USA. borya@bu.edu
Journal: BMC Bioinformatics. 09 2003;4(1):34
Publication Date: Wednesday, October 29, 2003
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Sex genes for genomic analysis in human brain: internal controls for comparison of probe level data extraction.
by Galfalvy HC, Erraji-Benchekroun L, Smyrniotopoulos P, Pavlidis P, Ellis SP, Mann JJ, Sibille E, Arango V.
Affliation: Department of Neuroscience, New York State Psychiatric Institute, New York, NY 10032, USA. hanga@neuron.cpmc.columbia.edu
Journal: BMC Bioinformatics. 09 2003;4(1):37
Publication Date: Wednesday, October 29, 2003
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An algorithm for mapping positively selected members of quasispecies-type viruses.
by Stewart JJ, Watts P, Litwin S.
Affliation: BioGenetic Ventures, 1100 Olive Way, Suite 300, Seattle, WA 98101 jjs@alumni.princeton.edu
Journal: BMC Bioinformatics. 2(1):1
Publication Date: Wednesday, October 29, 2003
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Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions.
by Edwards JS, Palsson BO.
Affliation: Department of Bioengineering, University of California, San Diego La Jolla, CA 92093-0412, USA. jedwards@arep.med.harvard.edu
Journal: BMC Bioinformatics. 1(1):1
Publication Date: Wednesday, October 29, 2003
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mRNA:guanine-N7 cap methyltransferases: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships.
by Bujnicki JM, Feder M, Radlinska M, Rychlewski L.
Affliation: Bioinformatics Laboratory, International Institute of Cell and Molecular Biology, ul, ks, Trojdena 4, 02-109 Warsaw, Poland. iamb@bioinfo.pl
Journal: BMC Bioinformatics. 2(1):2
Publication Date: Wednesday, October 29, 2003
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The relationship between the L1 and L2 domains of the insulin and epidermal growth factor receptors and leucine-rich repeat modules.
by Ward CW, Garrett TP.
Affliation: CSIRO Health Sciences and Nutrition, 343 Royal Parade Parkville, Victoria 3052, Australia. Colin.Ward@hsn.csiro.au
Journal: BMC Bioinformatics. 2(1):4
Publication Date: Wednesday, October 29, 2003
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