Bioinformatics classification and functional analysis of PhoH homologs.
by Kazakov AE, Vassieva O, Gelfand MS, Osterman A, Overbeek R.
Affliation: Integrated Genomics Inc, Moscow, Russia.
Journal: In Silico Biol. 12 2002;3(1-2):3-15
Publication Date: Tuesday, September 30, 2003
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An algorithm for identification of regulatory signals in unaligned DNA sequences, its testing and parallel implementation.
by Danilova LV, Lyubetsky VA, Gelfand MS.
Affliation: Institute for Information Transmission Problems RAS, Moscow, 101447, Russia. dlv2k@mail.ru
Journal: In Silico Biol. 04 2003;3(1-2):33-47
Publication Date: Tuesday, September 30, 2003
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Application of filter technology in photomorphogenesis gene network.
by Smirnova OG, Stepanenko IL.
Affliation: Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia. planta@bionet.nsc.ru
Journal: In Silico Biol. 02 2003;3(1-2):117-25
Publication Date: Tuesday, September 30, 2003
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Dynamic molecules: molecular dynamics for everyone. An internet-based access to molecular dynamic simulations: basic concepts.
by Frank M, Gutbrod P, Hassayoun C, Von Der Lieth CW.
Affliation: German Cancer Research Center, Central Spectroscopic Department B090, Im Neuenheimer Feld 280, 69120, Heidelberg, Germany.
Journal: J Mol Model (Online). 08 2003;9(5):308-15
Publication Date: Tuesday, September 30, 2003
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Computational detection of the binding-site hot spot at the remodeled human growth hormone-receptor interface.
by Verkhivker GM, Bouzida D, Gehlhaar DK, Rejto PA, Freer ST, Rose PW.
Affliation: Pfizer Global Research and Development, La Jolla Laboratories, San Diego, California 92121-1111, USA. gennady.verkhivker@pfizer.com
Journal: Proteins. 53(2):201-19
Publication Date: Tuesday, September 30, 2003
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Analysis of singleton ORFans in fully sequenced microbial genomes.
by Siew N, Fischer D.
Affliation: Department of Chemistry, Ben Gurion University, Beer-Sheva, Israel.
Journal: Proteins. 53(2):241-51
Publication Date: Tuesday, September 30, 2003
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Characterization of a strong repression domain in the hinge region of orphan nuclear receptor hB1F/hLRH-1.
by Xu PL, Shan SF, Kong YY, Xie YH, Wang Y.
Affliation: State Key Laboratory of Molecular Biology, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, the Chinese Academy of Sciences, Shanghai 200031, China.
Journal: Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 35(10):909-16
Publication Date: Monday, September 29, 2003
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Critical assessment of side-chain conformational space sampling procedures designed for quantifying the effect of side-chain environment.
by Gautier R, Tufféry P.
Affliation: Equipe de Bioinformatique Génomique et Moléculaire, INSERM E0346, Université Paris 7, case 7113, 2, place Jussieu, 75251 Paris cedex 05, France.
Journal: J Comput Chem. 24(15):1950-61
Publication Date: Monday, September 29, 2003
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Horizontal gene transfer accelerates genome innovation and evolution.
by Jain R, Rivera MC, Moore JE, Lake JA.
Affliation: Molecular, Cell, and Developmental Biology, University of California, Los Angeles, USA.
Journal: Mol Biol Evol. 05 2003;20(10):1598-602
Publication Date: Monday, September 29, 2003
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Protein evolution with dependence among codons due to tertiary structure.
by Robinson DM, Jones DT, Kishino H, Goldman N, Thorne JL.
Affliation: Bioinformatics Research Center, North Carolina State University, USA.
Journal: Mol Biol Evol. 07 2003;20(10):1692-704
Publication Date: Monday, September 29, 2003
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Photochemical ligation of DNA "words" for DNA computing.
by Kishi N, Ogino M, Saito I, Yoshimura Y, Fujimoto K.
Affliation: Faculty of Material Science, JAIST, 1-1, Tatsunokuchi-cho, Ishikawa 923-1292.
Journal: Nucleic Acids Res Suppl. (3):183-4
Publication Date: Friday, September 26, 2003
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RNA aptamer evaluation using comparative molecular interaction profile analysis system.
by Hayashi Y, Takahashi S, Sakaguchi K, Iwata N, Kobayashi M.
Affliation: Division of Bioinformatics, K-laboratories for Intelligent Medical Remote Services, Enkaku Iryou-laboratories Co., Ltd. 2266-22 Anagahora, Shimoshidami, Moriyama-ku, Nagoya 463-0003, Japan.
Journal: Nucleic Acids Res Suppl. (3):197-8
Publication Date: Friday, September 26, 2003
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Application of functional genomics in allergy and clinical immunology.
by Pawliczak R, Shelhamer JH.
Affliation: Critical Care Medicine Department, Warren Grant Magnuson Clinical Center, National Institute of Health, Bethesda, MD, USA. rafal.pawliczak@csk.am.lodz.pl
Journal: Allergy. 58(10):973-80
Publication Date: Friday, September 26, 2003
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Prediction of promiscuous and high-affinity mutated MHC binders.
by Bhasin M, Raghava GP.
Affliation: Bioinformatics Centre, Institute of Microbial Technology, Sector 39A, Chandigarh, India.
Journal: Hybrid Hybridomics. 22(4):229-34
Publication Date: Friday, September 26, 2003
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Identification of novel anti-angiogenic factors by in silico functional gene screening method.
by Lee SK, Choi YS, Cha J, Moon EJ, Lee SW, Bae MK, Sohn TK, Won Y, Ma S, Kong EB, Lee H, Lim S, Chang D, Kim YJ, Kim CW, Zhang BT, Kim KW.
Affliation: Angiogenesis Research Laboratory, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Seoul National University, San 56-1, Shinlim-Dong, Kwanak-Gu, Seoul 151-742, South Korea.
Journal: J Biotechnol. 105(1-2):51-60
Publication Date: Friday, September 26, 2003
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Genes to genetic immunization: identification of bacterial vaccine candidates.
by Allan E, Wren BW.
Affliation: Microbiology Department, Eastman Dental Institute, University College London, London, UK.
Journal: Methods. 31(3):193-8
Publication Date: Friday, September 26, 2003
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The EMBL sequence version archive.
by Leinonen R, Nardone F, Oyewole O, Redaschi N, Stoehr P.
Affliation: EMBL Outstation The European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Journal: Bioinformatics. 19(14):1861-2
Publication Date: Friday, September 26, 2003
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Genomics. A dog's breakfast?
by O'Brien SJ, Murphy WJ.
Affliation: Laboratory of Genomic Diversity, National Cancer Institute, Frederick, MD 21702, USA.
Journal: Science. 301(5641):1854-5
Publication Date: Friday, September 26, 2003
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The dog genome: survey sequencing and comparative analysis.
by Kirkness EF, Bafna V, Halpern AL, Levy S, Remington K, Rusch DB, Delcher AL, Pop M, Wang W, Fraser CM, Venter JC.
Affliation: The Institute for Genomic Research, Rockville, MD 20850, USA.
Journal: Science. 301(5641):1898-903
Publication Date: Friday, September 26, 2003
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Marking up structural biology.
by
Affliation:
Journal: Nat Struct Biol. 10(10):771
Publication Date: Friday, September 26, 2003
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