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Bioinformatics Journals and Computational Biology Journals


Bioinformatics Journals and Computational Biology Journals - May, 2003

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Proteomic prediction of disease outcome in cancer : clinical framework and current status.
by Steinert R, von Hoegen P, Fels LM, Günther K, Lippert H, Reymond MA.
Affliation: Department of Surgery, University of Magdeburg, Magdeburg, Germany.
Journal: Am J Pharmacogenomics. 3(2):107-15
Publication Date: Friday, May 16, 2003
PubMed citation

Genome informatics: current status and future prospects.
by Winslow RL, Boguski MS.
Affliation: The Whitaker Biomedical Engineering Institute and Center for Cardiovascular Bioinformatics and Modeling, The Johns Hopkins University School of Medicine, Baltimore, Md 21218, USA. rwinslow@bme.jhu.edu
Journal: Circ Res. 92(9):953-61
Publication Date: Friday, May 16, 2003
PubMed citation

[Current status of tailor-made medicine and the role of clinical pharmacology]
by Fujio S, Azuma J.
Affliation:
Journal: Nippon Yakurigaku Zasshi. 121(3):192-4
Publication Date: Thursday, May 15, 2003
PubMed citation

Coordination and thermodynamics of stable Zn(II) complexes in the gas phase.
by Smiesko M, Remko M.
Affliation: Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University, Odbojarov 10, SK-832 32 Bratislava, Slovakia. smiesko@fpharm.uniba.sk
Journal: J Biomol Struct Dyn. 20(6):759-70
Publication Date: Wednesday, May 14, 2003
PubMed citation

Theoretical ab initio study of the effects of methylation on structure and stability of G:C Watson-Crick base pair.
by Forde G, Flood A, Salter L, Hill G, Gorb L, Leszczynski J.
Affliation: Computational Center for Molecular Structure and Interactions, Jackson State University, Jackson, MS 39217, USA. gforde@ccmsi.us
Journal: J Biomol Struct Dyn. 20(6):811-7
Publication Date: Wednesday, May 14, 2003
PubMed citation

Comprehensive mutagenesis of HIV-1 protease: a computational geometry approach.
by Masso M, Vaisman II.
Affliation: Bioinformatics and Computational Biology, School of Computational Sciences, George Mason University, 10900 University Blvd., MSN 5B3, Manassas, VA 20110, USA.
Journal: Biochem Biophys Res Commun. 305(2):322-6
Publication Date: Wednesday, May 14, 2003
PubMed citation

Nearest neighbour algorithm for predicting protein subcellular location by combining functional domain composition and pseudo-amino acid composition.
by Cai YD, Chou KC.
Affliation: Shanghai Research Centre of Biotechnology, Chinese Academy of Sciences, Shanghai 200233, China. y.cai@umist.ac.uk
Journal: Biochem Biophys Res Commun. 305(2):407-11
Publication Date: Wednesday, May 14, 2003
PubMed citation

Identification of endothelial cell genes by combined database mining and microarray analysis.
by Ho M, Yang E, Matcuk G, Deng D, Sampas N, Tsalenko A, Tabibiazar R, Zhang Y, Chen M, Talbi S, Ho YD, Wang J, Tsao PS, Ben-Dor A, Yakhini Z, Bruhn L, Quertermous T.
Affliation: Donald W. Reynolds Cardiovascular Clinical Research Center, Division of Cardiovascular Medicine, Stanford University School of Medicine, Stanford, California 94305, USA.
Journal: Physiol Genomics. 5 2003;13(3):249-62
Publication Date: Wednesday, May 14, 2003
PubMed citation

Genomic profiles and predictive biological networks in oxidant-induced atherogenesis.
by Johnson CD, Balagurunathan Y, Lu KP, Tadesse M, Falahatpisheh MH, Carroll RJ, Dougherty ER, Afshari CA, Ramos KS.
Affliation: Center for Environmental and Rural Health, Texas A&M University, College Station, Texas 77843, USA.
Journal: Physiol Genomics. 5 2003;13(3):263-75
Publication Date: Wednesday, May 14, 2003
PubMed citation

Expression profiling and bioinformatic analyses of a novel stress-regulated multispanning transmembrane protein family from cereals and Arabidopsis.
by Breton G, Danyluk J, Charron JB, Sarhan F.
Affliation: Département des Sciences biologiques, Université du Québec Montréal, Case Postale 8888, succursale Centre-ville, Canada H3C 3P8.
Journal: Plant Physiol. 132(1):64-74
Publication Date: Wednesday, May 14, 2003
PubMed citation

Plausible interaction of an alpha-fetoprotein cyclopeptide with the G-protein-coupled receptor model GPR30: docking study by molecular dynamics simulated annealing.
by Hamza A, Sarma MH, Sarma RH.
Affliation: Unité de Modélisation Moleculaire, Institut Pasteur de Tunis, 13 place Pasteur, BP 74, 1002 Tunis-Belvedere, Tunisia. adel.hamza@pasteur.rns.tn
Journal: J Biomol Struct Dyn. 20(6):751-8
Publication Date: Wednesday, May 14, 2003
PubMed citation



DataGrid, prototype of a biomedical grid.
by Breton V, Medina R, Montagnat J.
Affliation: Laboratoire de Physique Corpusculaire, CNRS-IN2P3, Campus des Cézeaux, Aubière, France. breton@clermont.in2p3.fr
Journal: Methods Inf Med. 42(2):143-7
Publication Date: Tuesday, May 13, 2003
PubMed citation

Gene expression profiling of the cellular transcriptional network regulated by alpha/beta interferon and its partial attenuation by the hepatitis C virus nonstructural 5A protein.
by Geiss GK, Carter VS, He Y, Kwieciszewski BK, Holzman T, Korth MJ, Lazaro CA, Fausto N, Bumgarner RE, Katze MG.
Affliation: Department of Microbiology, School of Medicine, University of Washington, Seattle 98195, USA.
Journal: J Virol. 77(11):6367-75
Publication Date: Tuesday, May 13, 2003
PubMed citation

Bioscience and analytical thinking machines.
by Stevenson A.
Affliation: Institute of Biotechnology, University of Cambridge, Tennis Court Road, Cambridge, UK CB2 1QT.
Journal: Analyst. 128(4):318-9
Publication Date: Tuesday, May 13, 2003
PubMed citation

Computational cell biology.
by Mellman I, Misteli T.
Affliation:
Journal: J Cell Biol. 161(3):463-4
Publication Date: Tuesday, May 13, 2003
PubMed citation

Inventories to insights.
by Aitchison JD, Galitski T.
Affliation: Institute for Systems Biology, Seattle, WA 98103-8904, USA. jaitchison@systemsbiology.org
Journal: J Cell Biol. 161(3):465-9
Publication Date: Tuesday, May 13, 2003
PubMed citation

Modeling network dynamics: the lac operon, a case study.
by Vilar JM, Guet CC, Leibler S.
Affliation: The Rockefeller University, 1230 York Avenue, Box 34, New York, NY 10021, USA. vilarj@rockefeller.edu
Journal: J Cell Biol. 161(3):471-6
Publication Date: Tuesday, May 13, 2003
PubMed citation

Computational imaging in cell biology.
by Eils R, Athale C.
Affliation: Intelligent Bioinformatics Systems Division, German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany. r.eils@dkfz.de
Journal: J Cell Biol. 161(3):477-81
Publication Date: Tuesday, May 13, 2003
PubMed citation

Boudicca, a retrovirus-like long terminal repeat retrotransposon from the genome of the human blood fluke Schistosoma mansoni.
by Copeland CS, Brindley PJ, Heyers O, Michael SF, Johnston DA, Williams DL, Ivens AC, Kalinna BH.
Affliation: Department of Tropical Medicine, School of Public Health and Tropical Medicine, Tulane University Health Sciences Center, New Orleans, Louisiana 70112, USA.
Journal: J Virol. 77(11):6153-66
Publication Date: Tuesday, May 13, 2003
PubMed citation

FLJ10261 gene, located within the CCND1-EMS1 locus on human chromosome 11q13, encodes the eight-transmembrane protein homologous to C12orf3, C11orf25 and FLJ34272 gene products.
by Katoh M, Katoh M.
Affliation: M&M Medical BioInformatics, Narashino 275-0022, Japan. mkatoh@ncc.go.jp
Journal: Int J Oncol. 22(6):1375-81
Publication Date: Friday, May 09, 2003
PubMed citation

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