Leveraging the mouse genome for gene prediction in human: from whole-genome shotgun reads to a global synteny map.
by Flicek P, Keibler E, Hu P, Korf I, Brent MR.
Affliation: Department of Computer Science and Engineering, Washington University, St. Louis, Missouri 63130, USA.
Journal: Genome Res. 13(1):46-54
Publication Date: Thursday, January 16, 2003
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Identification of a novel cell cycle regulated gene, HURP, overexpressed in human hepatocellular carcinoma.
by Tsou AP, Yang CW, Huang CY, Yu RC, Lee YC, Chang CW, Chen BR, Chung YF, Fann MJ, Chi CW, Chiu JH, Chou CK.
Affliation: Institute of Biotechnology in Medicine, National Yang-Ming University, Taipei, Taiwan.
Journal: Oncogene. 22(2):298-307
Publication Date: Wednesday, January 15, 2003
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Structural classification of zinc fingers: survey and summary.
by Krishna SS, Majumdar I, Grishin NV.
Affliation: Department of Biochemistry, University of Texas, Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9050, USA. krishna@chop.swmed.edu
Journal: Nucleic Acids Res. 31(2):532-50
Publication Date: Wednesday, January 15, 2003
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Probing the binding of the flavonoid, quercetin to human serum albumin by circular dichroism, electronic absorption spectroscopy and molecular modelling methods.
by Zsila F, Bikádi Z, Simonyi M.
Affliation: Department of Molecular Pharmacology, Institute of Chemistry, Chemical Research Center, P.O. Box 17, H-1525, Budapest, Hungary. zsferi@chemres.hu
Journal: Biochem Pharmacol. 65(3):447-56
Publication Date: Wednesday, January 15, 2003
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John Jacquez memorial volume.
by
Affliation:
Journal: Math Biosci. 2002 Nov-Dec;180:v-ix, 1-362
Publication Date: Tuesday, January 14, 2003
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Identification and characterization of human PRICKLE1 and PRICKLE2 genes as well as mouse Prickle1 and Prickle2 genes homologous to Drosophila tissue polarity gene prickle.
by Katoh M, Katoh M.
Affliation: M&M Medical BioInformatics, Narashino 275-0022, Japan.
Journal: Int J Mol Med. 11(2):249-56
Publication Date: Tuesday, January 14, 2003
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19 A solution structure of the filarial nematode immunomodulatory protein, ES-62.
by Ackerman CJ, Harnett MM, Harnett W, Kelly SM, Svergun DI, Byron O.
Affliation: Division of Infection and Immunity, Institute of Biomedical and Life Sciences, University of Glasgow, United Kingdom.
Journal: Biophys J. 84(1):489-500
Publication Date: Monday, January 13, 2003
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Understanding biological complexity: lessons from the past.
by Weiss JN, Qu Z, Garfinkel A.
Affliation: The UCLA Cardiovascular Research Laboratory, and Department of Medicine (Cardiology), UCLA School of Medicine, Los Angeles, California 90095-1760, USA. jweiss@mednet.ucla.edu
Journal: FASEB J. 17(1):1-6
Publication Date: Friday, January 10, 2003
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Sorting signals from protein NMR spectra: SPI, a Bayesian protocol for uncovering spin systems.
by Grishaev A, Llin?ás M.
Affliation: Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Journal: J Biomol NMR. 24(3):203-13
Publication Date: Friday, January 10, 2003
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The RESID Database of Protein Modifications: 2003 developments.
by Garavelli JS.
Affliation: The EMBL Outstation-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. john.garavelli@ebi.ac.uk
Journal: Nucleic Acids Res. 31(1):499-501
Publication Date: Thursday, January 09, 2003
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The multidrug transporters belonging to major facilitator superfamily in Mycobacterium tuberculosis.
by De Rossi E, Arrigo P, Bellinzoni M, Silva PA, Martín C, Aínsa JA, Guglierame P, Riccardi G.
Affliation: Dipartimento di Genetica e Microbiologia, Universit degli Studi di Pavia, Italy. derossi@ipvgen.unipv.it
Journal: Mol Med. 8(11):714-24
Publication Date: Thursday, January 09, 2003
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An active DNA transposon family in rice.
by Jiang N, Bao Z, Zhang X, Hirochika H, Eddy SR, McCouch SR, Wessler SR.
Affliation: Department of Plant Biology, University of Georgia, Athens, Georgia 30602, USA.
Journal: Nature. 421(6919):163-7
Publication Date: Thursday, January 09, 2003
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Computational bioanalysis of proteins.
by Fischer WB.
Affliation: Biomembrane Structure Unit, Department of Biochemistry, Oxford University, South Parks Road, Oxford OX1 3QU, UK. wolfgang.fischer@bioch.ox.ac.uk
Journal: Anal Bioanal Chem. 11 2002;375(1):23-5
Publication Date: Thursday, January 09, 2003
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E-MSD: the European Bioinformatics Institute Macromolecular Structure Database.
by Boutselakis H, Dimitropoulos D, Fillon J, Golovin A, Henrick K, Hussain A, Ionides J, John M, Keller PA, Krissinel E, McNeil P, Naim A, Newman R, Oldfield T, Pineda J, Rachedi A, Copeland J, Sitnov A, Sobhany S, Suarez-Uruena A, Swaminathan J, Tagari M, Tate J, Tromm S, Velankar S, Vranken W.
Affliation: EMBL Outstation, The European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Journal: Nucleic Acids Res. 31(1):458-62
Publication Date: Thursday, January 09, 2003
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Gene3D: structural assignments for the biologist and bioinformaticist alike.
by Buchan DW, Rison SC, Bray JE, Lee D, Pearl F, Thornton JM, Orengo CA.
Affliation: Biomolecular Structure and Modelling Group, Department of Biochemistry and Molecular Biology, University College London, Gower Street, London WC1E 6BT, UK.
Journal: Nucleic Acids Res. 31(1):469-73
Publication Date: Thursday, January 09, 2003
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rSNP_Guide, a database system for analysis of transcription factor binding to DNA with variations: application to genome annotation.
by Ponomarenko JV, Merkulova TI, Orlova GV, Fokin ON, Gorshkova EV, Frolov AS, Valuev VP, Ponomarenko MP.
Affliation: Institute of Cytology and Genetics, 10 Lavrentyev Avenue, Novosibirsk, 630090, Russia. jpon@bionet.nsc.ru
Journal: Nucleic Acids Res. 31(1):118-21
Publication Date: Thursday, January 09, 2003
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The ERGO genome analysis and discovery system.
by Overbeek R, Larsen N, Walunas T, D'Souza M, Pusch G, Selkov E, Liolios K, Joukov V, Kaznadzey D, Anderson I, Bhattacharyya A, Burd H, Gardner W, Hanke P, Kapatral V, Mikhailova N, Vasieva O, Osterman A, Vonstein V, Fonstein M, Ivanova N, Kyrpides N.
Affliation: Integrated Genomics Inc., 2201 West Campbell Park Drive, Chicago, IL 60612, USA. ross@integratedgenomics.com
Journal: Nucleic Acids Res. 31(1):164-71
Publication Date: Thursday, January 09, 2003
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GénoPlante-Info (GPI): a collection of databases and bioinformatics resources for plant genomics.
by Samson D, Legeai F, Karsenty E, Reboux S, Veyrieras JB, Just J, Barillot E.
Affliation: Génoplante-Info, Unité de Recherche Génomique-Info, INRA, Infobiogen, 523 Place des Terrasses, F-91000 Evry, France. delphine.samson@infobiogen.fr
Journal: Nucleic Acids Res. 31(1):179-82
Publication Date: Thursday, January 09, 2003
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The PEDANT genome database.
by Frishman D, Mokrejs M, Kosykh D, Kastenmüller G, Kolesov G, Zubrzycki I, Gruber C, Geier B, Kaps A, Albermann K, Volz A, Wagner C, Fellenberg M, Heumann K, Mewes HW.
Affliation: Institute for Bioinformatics, GSF - National Research Center for Environment and Health, Ingolstädter Landstrasse 1, 85764 Neueherberg, Germany. d.frishman@gsf.de
Journal: Nucleic Acids Res. 31(1):207-11
Publication Date: Thursday, January 09, 2003
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PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data.
by Bahl A, Brunk B, Crabtree J, Fraunholz MJ, Gajria B, Grant GR, Ginsburg H, Gupta D, Kissinger JC, Labo P, Li L, Mailman MD, Milgram AJ, Pearson DS, Roos DS, Schug J, Stoeckert CJ, Whetzel P.
Affliation: Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Journal: Nucleic Acids Res. 31(1):212-5
Publication Date: Thursday, January 09, 2003
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