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Bioinformatics Journals and Computational Biology Journals


Bioinformatics Journals and Computational Biology Journals - January, 2003

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Want novel drugs in a hurry? You had better do the math!
by Maggio ET.
Affliation: Structural Bioinformatics, San Diego, CA, USA.
Journal: Drug Discov Today. 7(16):855-6
Publication Date: Monday, January 27, 2003
PubMed citation

Chris Lipinski discusses life and chemistry after the Rule of Five.
by Lipinski CA.
Affliation: Pfizer Global R&D, Groton Labs, Eastern Point Road, MS 8200-36, Groton, CT, USA.
Journal: Drug Discov Today. 8(1):12-6
Publication Date: Monday, January 27, 2003
PubMed citation

Functional fingerprints of folds: evidence for correlated structure-function evolution.
by Shakhnovich BE, Dokholyan NV, DeLisi C, Shakhnovich EI.
Affliation: Bioinformatics Program, Boston University, Boston, MA 02215, USA.
Journal: J Mol Biol. 326(1):1-9
Publication Date: Monday, January 27, 2003
PubMed citation

An accurate, sensitive, and scalable method to identify functional sites in protein structures.
by Yao H, Kristensen DM, Mihalek I, Sowa ME, Shaw C, Kimmel M, Kavraki L, Lichtarge O.
Affliation: Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza T921, Houston, TX 77030, USA.
Journal: J Mol Biol. 326(1):255-61
Publication Date: Monday, January 27, 2003
PubMed citation

Sequence and structure patterns in proteins from an analysis of the shortest helices: implications for helix nucleation.
by Pal L, Chakrabarti P, Basu G.
Affliation: Department of Biochemistry, Bose Institute, P-1/12 CIT Scheme VIIM, 700 054, Calcutta, India.
Journal: J Mol Biol. 326(1):273-91
Publication Date: Monday, January 27, 2003
PubMed citation

COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance.
by Sadreyev R, Grishin N.
Affliation: Howard Hughes Medical Institute, and Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, TX 75390-9050, USA.
Journal: J Mol Biol. 326(1):317-36
Publication Date: Monday, January 27, 2003
PubMed citation

Ontologies for proteomics: towards a systematic definition of structure and function that scales to the genome level.
by Lan N, Montelione GT, Gerstein M.
Affliation: Department of Molecular Biophysics, New Haven, CT 06520, USA. lan@bioinfo.mbb.yale.edu
Journal: Curr Opin Chem Biol. 7(1):44-54
Publication Date: Monday, January 27, 2003
PubMed citation

Peptide libraries: at the crossroads of proteomics and bioinformatics.
by Turk BE, Cantley LC.
Affliation: Department of Cell Biology, Harvard Medical School, Beth Israel Deaconess Medical Center, HIM 1022, 330 Brookline Avenue, Boston, MA 02215, USA.
Journal: Curr Opin Chem Biol. 7(1):84-90
Publication Date: Monday, January 27, 2003
PubMed citation

Genome-wide analysis of signaling domain function.
by Yu JW, Lemmon MA.
Affliation: Graduate Group in Pharmacology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Journal: Curr Opin Chem Biol. 7(1):103-9
Publication Date: Monday, January 27, 2003
PubMed citation

Computational bioinorganic chemistry. Part III. The tools of the trade: from high-level ab initio calculations to structural bioinformatics.
by Ghosh A.
Affliation: Department of Chemistry, University of Tromsø, N-9037 Tromsø, Norway. abhik@chem.uit.no
Journal: Curr Opin Chem Biol. 7(1):110-2
Publication Date: Monday, January 27, 2003
PubMed citation

Molecular modeling of ion channels: structural predictions.
by Giorgetti A, Carloni P.
Affliation: International School for Advanced Studies, via Beirut 2, 34014 Trieste, Italy.
Journal: Curr Opin Chem Biol. 7(1):150-6
Publication Date: Monday, January 27, 2003
PubMed citation



Expanding the organismal scope of proteomics: cross-species protein identification by mass spectrometry and its implications.
by Liska AJ, Shevchenko A.
Affliation: Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
Journal: Proteomics. 3(1):19-28
Publication Date: Monday, January 27, 2003
PubMed citation

Computational model of the cockroach escape behavior: winner and losers in a population code.
by Ezrachi EA.
Affliation: The Center for Neural Computation, Hebrew University, Jerusalem 91904, Israel. erez@piano.ls.huji.ac.il
Journal: Biol Cybern. 88(1):33-45
Publication Date: Friday, January 24, 2003
PubMed citation

Different facets of a computational equivalent of genetic addition.
by Ullah AM.
Affliation: Industrial Systems Engineering Program, School of Advanced Technologies, Asian Institute of Technology, P.O. Box 4, Klong Luang, Pathumthani 12120, Thailand. a.sharif@uaeu.ac.ae
Journal: Biosystems. 68(1):31-41
Publication Date: Friday, January 24, 2003
PubMed citation

Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry.
by Adkins JN, Varnum SM, Auberry KJ, Moore RJ, Angell NH, Smith RD, Springer DL, Pounds JG.
Affliation: Biological Sciences Department, Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
Journal: Mol Cell Proteomics. 1(12):947-55
Publication Date: Friday, January 24, 2003
PubMed citation

Abundance and distributions of eukaryote protein simple sequences.
by Sim KL, Creamer TP.
Affliation: Center for Structural Biology, Department of Molecular and Cellular Biochemistry, University of Kentucky, Lexington, Kentucky 40536-0298, USA.
Journal: Mol Cell Proteomics. 1(12):983-95
Publication Date: Friday, January 24, 2003
PubMed citation

Bioinformatics. Private pact ends the DNA data war.
by Roberts L.
Affliation:
Journal: Science. 299(5606):487-9
Publication Date: Friday, January 24, 2003
PubMed citation

Communication. Science and the semantic web.
by Hendler J.
Affliation: Computer Science Department, University of Maryland, College Park, MD 20742, USA. hendler@cs.umd.edu
Journal: Science. 299(5606):520-1
Publication Date: Friday, January 24, 2003
PubMed citation

Genetic advances will influence the practice of medicine: examples from cancer research and care of cancer patients.
by Omenn GS.
Affliation: University of Michigan Health System, Ann Arbor, 48109-0626, USA.
Journal: Genet Med. 2002 Nov-Dec;4(6 Suppl):15S-20S
Publication Date: Friday, January 24, 2003
PubMed citation

Cloning and sequence analysis of tumor-associated gene hMMTAG2 from human multiple myeloma cell line ARH-77.
by Tian JY, Hu WX, Tian EM, Shi YW, Shen QX, Tang LJ, Jiang YS.
Affliation: Molecular Biology Research Center, Xiangya Medical College, Central South University, Changsha 410078, China.
Journal: Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 35(2):143-8
Publication Date: Friday, January 24, 2003
PubMed citation

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