A stem cell molecular signature.
by Ivanova NB, Dimos JT, Schaniel C, Hackney JA, Moore KA, Lemischka IR.
Affliation: Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.
Journal: Science. 09 2002;298(5593):601-4
Publication Date: Friday, October 18, 2002
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A computational framework for optimal masking in the synthesis of oligonucleotide microarrays.
by Kasif S, Weng Z, Derti A, Beigel R, DeLisi C.
Affliation: Center for Advanced Genomic Technology, Bioinformatics Program and Biomedical Engineering Department, Boston University, Boston, MA 02215, USA. kasif@bu.edu
Journal: Nucleic Acids Res. 30(20):e106
Publication Date: Thursday, October 17, 2002
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Genome analysis at your fingertips.
by Chicurel M.
Affliation:
Journal: Nature. 419(6908):751, 753
Publication Date: Thursday, October 17, 2002
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Bioinformatics: bringing it all together.
by Chicurel M.
Affliation:
Journal: Nature. 419(6908):751, 753, 755 passim
Publication Date: Thursday, October 17, 2002
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SIRT3, a human SIR2 homologue, is an NAD-dependent deacetylase localized to mitochondria.
by Onyango P, Celic I, McCaffery JM, Boeke JD, Feinberg AP.
Affliation: Institute of Genetic Medicine, Department of Medicine, The Johns Hopkins University School of Medicine, 1064 Ross, 720 Rutland Avenue, Baltimore, MD 21205, USA.
Journal: Proc Natl Acad Sci U S A. 10 2002;99(21):13653-8
Publication Date: Wednesday, October 16, 2002
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Dynamics of Boolean networks controlled by biologically meaningful functions.
by Raeymaekers L.
Affliation: Laboratorium voor Fysiologie, K.U. Leuven, Campus Gasthuisberg O/N, B3000 Leuven, Belgium. luc.raeymaekers@med.kuleuven.ac.be
Journal: J Theor Biol. 218(3):331-41
Publication Date: Wednesday, October 16, 2002
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Serum proteomic patterns for detection of prostate cancer.
by Petricoin EF, Ornstein DK, Paweletz CP, Ardekani A, Hackett PS, Hitt BA, Velassco A, Trucco C, Wiegand L, Wood K, Simone CB, Levine PJ, Linehan WM, Emmert-Buck MR, Steinberg SM, Kohn EC, Liotta LA.
Affliation: Food and Drug Administration (FDA)-National Cancer Institute (NCI) Clinical Proteomics Program, Department of Therapeutic Proteins/Center for Biologics Evaluation and Research (CBER), Bethesda, MD, USA. petricoin@cber.fda.gov
Journal: J Natl Cancer Inst. 94(20):1576-8
Publication Date: Wednesday, October 16, 2002
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Construction of a fluorescent biosensor family.
by de Lorimier RM, Smith JJ, Dwyer MA, Looger LL, Sali KM, Paavola CD, Rizk SS, Sadigov S, Conrad DW, Loew L, Hellinga HW.
Affliation: Department of Biochemistry, Duke University Medical Center, Durham, North Carolina 27710, USA.
Journal: Protein Sci. 11(11):2655-75
Publication Date: Wednesday, October 16, 2002
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Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction.
by Zhou H, Zhou Y.
Affliation: Howard Hughes Medical Institute Center for Single Molecule Biophysics, Department of Physiology & Biophysics, State University of New York at Buffalo, Buffalo, New York 14214, USA.
Journal: Protein Sci. 11(11):2714-26
Publication Date: Wednesday, October 16, 2002
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A statistically derived parameterization for the collagen triple-helix.
by Rainey JK, Goh MC.
Affliation: Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada.
Journal: Protein Sci. 11(11):2748-54
Publication Date: Wednesday, October 16, 2002
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Chemical waves and fibrillating hearts: discovery by computation.
by Winfree AT.
Affliation: Department of Ecology and Evolutionary Biology, University of Arizona, Tueson 85721, USA. winfree@email.arizona.edu
Journal: J Biosci. 27(5):465-73
Publication Date: Wednesday, October 16, 2002
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Coupling interactions of distal residues enhance dihydrofolate reductase catalysis: mutational effects on hydride transfer rates.
by Rajagopalan PT, Lutz S, Benkovic SJ.
Affliation: Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.
Journal: Biochemistry. 41(42):12618-28
Publication Date: Tuesday, October 15, 2002
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The cryptophycin-tubulin ring structure indicates two points of curvature in the tubulin dimer.
by Watts NR, Cheng N, West W, Steven AC, Sackett DL.
Affliation: Protein Expression Laboratory, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA.
Journal: Biochemistry. 41(42):12662-9
Publication Date: Tuesday, October 15, 2002
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Antibodies to acetylcholine receptor in parous women with myasthenia: evidence for immunization by fetal antigen.
by Matthews I, Sims G, Ledwidge S, Stott D, Beeson D, Willcox N, Vincent A.
Affliation: Neurosciences Group, Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Oxford OX3 9DS, United Kingdom.
Journal: Lab Invest. 82(10):1407-17
Publication Date: Tuesday, October 15, 2002
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Characteristic sequences for DNA primary sequence.
by He PA, Wang J.
Affliation: Department of Applied Mathematics and College of Advanced Science and Technology, Dalian University of Technology, Dalian 116024, PR China. pinganhe@yahoo.com.cn
Journal: J Chem Inf Comput Sci. 2002 Sep-Oct;42(5):1080-5
Publication Date: Monday, October 14, 2002
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Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer.
by Bärlund M, Monni O, Weaver JD, Kauraniemi P, Sauter G, Heiskanen M, Kallioniemi OP, Kallioniemi A.
Affliation: Laboratory of Cancer Genetics, Institute of Medical Technology, University of Tampere and Tampere University Hospital, Tampere, Finland.
Journal: Genes Chromosomes Cancer. 35(4):311-7
Publication Date: Monday, October 14, 2002
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Mathematical modelling for the new millenium: medicine by numbers.
by Smye SW, Clayton RH.
Affliation: Department of Medical Physics and Engineering, Leeds Teaching Hospitals, St James's University Hospital, Beckett Street, LS9 7TF, Leeds, UK. s.w.smye@leeds.ac.uk
Journal: Med Eng Phys. 24(9):565-74
Publication Date: Friday, October 11, 2002
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An intelligent biological information management system.
by Palakal M, Mukhopadhyay S, Mostafa J, Raje R, N'Cho M, Mishra S.
Affliation: Computer Science Department, Indiana University Purdue University Indianapolis, Indianapolis, IN 46202, USA. mpalakal@cs.iupui.edu
Journal: Bioinformatics. 18(10):1283-8
Publication Date: Friday, October 11, 2002
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Data mining of sequences and 3D structures of allergenic proteins.
by Ivanciuc O, Schein CH, Braun W.
Affliation: Sealy Center for Structural Biology, Department of Human Biological Chemistry and Genetics, University of Texas Medical Branch, Galveston, TX 77555-1157, USA.
Journal: Bioinformatics. 18(10):1358-64
Publication Date: Friday, October 11, 2002
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Finding motifs in the twilight zone.
by Keich U, Pevzner PA.
Affliation: Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA 92093, USA. keich@cs.ucsd.edu
Journal: Bioinformatics. 18(10):1374-81
Publication Date: Friday, October 11, 2002
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