Simplifying amino acid alphabets by means of a branch and bound algorithm and substitution matrices.
by Cannata N, Toppo S, Romualdi C, Valle G.
Affliation: CRIBI Biotechnology Centre, Universitá di Padova, via Ugo Bassi 58/B, Italy.
Journal: Bioinformatics. 18(8):1102-8
Publication Date: Wednesday, August 14, 2002
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The NCTU BioInfo Archive of biological data sets for bioinformatics research and experimentation.
by Hu YJ.
Affliation: Computer and Information Science Department, National Chiao Tung University, Taiwan, ROC. yhu@cis.nctu.edu.tw
Journal: Bioinformatics. 18(8):1145-6
Publication Date: Wednesday, August 14, 2002
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Bacterial pathogen genomics and vaccines.
by Moxon R, Rappuoli R.
Affliation: Molecular Infectious Diseases Group, Weatherall Institute of Molecular Medicine and University of Oxford Department of Paediatrics, John Radcliffe Hospital, Oxford UK.
Journal: Br Med Bull. 62:45-58
Publication Date: Wednesday, August 14, 2002
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Transcendent elements: whole-genome transposon screens and open evolutionary questions.
by Holmes I.
Affliation: Bioinformatics Group, Department of Statistics, University of Oxford, Oxford OXI 3TG, United Kingdom. holmes@stats.ox.ac.uk
Journal: Genome Res. 12(8):1152-5
Publication Date: Wednesday, August 14, 2002
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Intraproteomic networks: new forays into predicting interaction partners.
by Aravind L, Iyer LM.
Affliation: National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland, 20894, USA. aravind@ncbi.nlm.nih.gov
Journal: Genome Res. 12(8):1156-8
Publication Date: Wednesday, August 14, 2002
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Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast.
by Brinkman FS, Blanchard JL, Cherkasov A, Av-Gay Y, Brunham RC, Fernandez RC, Finlay BB, Otto SP, Ouellette BF, Keeling PJ, Rose AM, Hancock RE, Jones SJ, Greberg H.
Affliation: Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada, V5A 1S6. brinkman@sfu.ca
Journal: Genome Res. 12(8):1159-67
Publication Date: Wednesday, August 14, 2002
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Predicting protein cellular localization using a domain projection method.
by Mott R, Schultz J, Bork P, Ponting CP.
Affliation: Wellcome Trust Centre for Human Genetics, Oxford OX3 7BN, United Kingdom.
Journal: Genome Res. 12(8):1168-74
Publication Date: Wednesday, August 14, 2002
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Functional cloning, sorting, and expression profiling of nucleic acid-binding proteins.
by Ramanathan Y, Zhang H, Aris V, Soteropoulos P, Aaronson SA, Tolias PP.
Affliation: Center for Applied Genomics, Public Health Research Institute, International Center for Public Health W420M, Newark, New Jersey 07103, USA.
Journal: Genome Res. 12(8):1175-84
Publication Date: Wednesday, August 14, 2002
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Parallel identification of new genes in Saccharomyces cerevisiae.
by Oshiro G, Wodicka LM, Washburn MP, Yates JR, Lockhart DJ, Winzeler EA.
Affliation: Genomics Institute of the Novartis Research Foundation, San Diego, California 92121, USA.
Journal: Genome Res. 12(8):1210-20
Publication Date: Wednesday, August 14, 2002
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Computational identification of operons in microbial genomes.
by Zheng Y, Szustakowski JD, Fortnow L, Roberts RJ, Kasif S.
Affliation: Bioinformatics Graduate Program, Boston University, Boston, Massachusetts 02215, USA.
Journal: Genome Res. 12(8):1221-30
Publication Date: Wednesday, August 14, 2002
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Large-scale proteomic analysis of the human spliceosome.
by Rappsilber J, Ryder U, Lamond AI, Mann M.
Affliation: Protein Interaction Laboratory in the Center of Experimental Bioinformatics, Department of Biochemistry and Molecular Biology, University of Southern Denmark, DK-5230 Odense M, Denmark.
Journal: Genome Res. 12(8):1231-45
Publication Date: Wednesday, August 14, 2002
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Automated de novo identification of repeat sequence families in sequenced genomes.
by Bao Z, Eddy SR.
Affliation: Howard Hughes Medical Institute and Department of Genetics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Journal: Genome Res. 12(8):1269-76
Publication Date: Wednesday, August 14, 2002
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Exploring the sialome of the tick Ixodes scapularis.
by Valenzuela JG, Francischetti IM, Pham VM, Garfield MK, Mather TN, Ribeiro JM.
Affliation: Medical Entomology Section, Laboratory of Parasitic Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland 20892-0425, USA.
Journal: J Exp Biol. 205(Pt 18):2843-64
Publication Date: Wednesday, August 14, 2002
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Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family.
by Callebaut I, Moshous D, Mornon JP, de Villartay JP.
Affliation: Systèmes moléculaires et Biologie structurale, LMCP, CNRS UMR 7590, Universités Paris 6 et Paris 7, case 115, 4 place Jussieu, F-75252 Paris Cedex 05, France. isabelle.callebaut@lmcp.jussieu.fr
Journal: Nucleic Acids Res. 30(16):3592-601
Publication Date: Wednesday, August 14, 2002
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A functional gene discovery in the Fas-mediated pathway to apoptosis by analysis of transiently expressed randomized hybrid-ribozyme libraries.
by Kawasaki H, Taira K.
Affliation: Department of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo, Hongo, Tokyo 113-8656, Japan.
Journal: Nucleic Acids Res. 30(16):3609-14
Publication Date: Wednesday, August 14, 2002
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A functional screening assay for the isolation of transcription factors.
by Wiesner C, Hoeth M, Binder BR, de Martin R.
Affliation: Department of Vascular Biology and Thrombosis Research, University of Vienna, and BMT-Biomolecular Therapeutics GmbH, Brunnerstrasse 59, A-1235 Vienna, Austria.
Journal: Nucleic Acids Res. 30(16):e80
Publication Date: Wednesday, August 14, 2002
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Statistical methods for microarray assays.
by Krajewski P, Bocianowski J.
Affliation: Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland. pkra@igr.poznan.pl
Journal: J Appl Genet. 43(3):269-78
Publication Date: Wednesday, August 14, 2002
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New science for an old problem.
by Kirkwood TB.
Affliation: Department of Gerontology, University of Newcastle, Institute for Ageing and Health, Newcastle General Hospital, Newcastle upon Tyne, UK NE4 6BE. Tom.Kirkwood@ncl.ac.uk
Journal: Trends Genet. 18(9):441-2
Publication Date: Wednesday, August 14, 2002
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Genome trees and the tree of life.
by Wolf YI, Rogozin IB, Grishin NV, Koonin EV.
Affliation: National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Journal: Trends Genet. 18(9):472-9
Publication Date: Wednesday, August 14, 2002
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Evidence for Cu(I)-thiolate ligation and prediction of a putative copper-binding site in the Escherichia coli NADH dehydrogenase-2.
by Rapisarda VA, Chehín RN, De Las Rivas J, Rodríguez-Montelongo L, Farías RN, Massa EM.
Affliation: Departamento Bioquímica de la Nutrición, Instituto Superior de Investigaciones Biológicas, Universidad Nacional de Tucumán, Chacabuco 461, San Miguel de Tucumán, Argentina.
Journal: Arch Biochem Biophys. 405(1):87-94
Publication Date: Wednesday, August 14, 2002
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