[Deposition with the Protein Data Bank]
by Kusunoki M.
Affliation: kusunoki@protein.osaka-u.ac.jp
Journal: Tanpakushitsu Kakusan Koso. 47(6):736-9
Publication Date: Wednesday, May 08, 2002
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Time for a unified system of mutation description and reporting: a review of locus-specific mutation databases.
by Claustres M, Horaitis O, Vanevski M, Cotton RG.
Affliation: Genomic Disorders Research Centre, St. Vincent's Hospital Melbourne, Fitzroy VIC 3065, Australia.
Journal: Genome Res. 12(5):680-8
Publication Date: Wednesday, May 08, 2002
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Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods.
by GuhaThakurta D, Palomar L, Stormo GD, Tedesco P, Johnson TE, Walker DW, Lithgow G, Kim S, Link CD.
Affliation: Department of Genetics, Washington University School of Medicine, St. Louis, Missouri 63114, USA.
Journal: Genome Res. 12(5):701-12
Publication Date: Wednesday, May 08, 2002
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Discovery of regulatory elements by a computational method for phylogenetic footprinting.
by Blanchette M, Tompa M.
Affliation: Department of Computer Science and Engineering, University of Washington, Seattle, Washington 98195-2350, USA.
Journal: Genome Res. 12(5):739-48
Publication Date: Wednesday, May 08, 2002
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Evidence suggesting that a fifth of annotated Caenorhabditis elegans genes may be pseudogenes.
by Mounsey A, Bauer P, Hope IA.
Affliation: School of Biology, University of Leeds, Leeds, LS2 9JT, United Kingdom.
Journal: Genome Res. 12(5):770-5
Publication Date: Wednesday, May 08, 2002
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Large-scale protein annotation through gene ontology.
by Xie H, Wasserman A, Levine Z, Novik A, Grebinskiy V, Shoshan A, Mintz L.
Affliation: Compugen Inc., Jamesburg, New Jersey 08831, USA. han@cgen.com
Journal: Genome Res. 12(5):785-94
Publication Date: Wednesday, May 08, 2002
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Protein coding palindromes are a unique but recurrent feature in Rickettsia.
by Ogata H, Audic S, Abergel C, Fournier PE, Claverie JM.
Affliation: Information Génétique & Structurale, CNRS-AVENTIS UMR 1889, 13402 Marseille Cedex 20, France. Hiroyuki.Ogata@igs.cnrs-mrs.fr
Journal: Genome Res. 12(5):808-16
Publication Date: Wednesday, May 08, 2002
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Experimental and bioinformatics comparison of gene expression between T cells from TIL of liver cancer and T cells from UniGene.
by Li B, Perabekam S, Liu G, Yin M, Song S, Larson A.
Affliation: Department of Biochemistry, Case Western Reserve University School of Medicine, Cleveland, OH 44106-4935, USA.
Journal: J Gastroenterol. 37(4):275-82
Publication Date: Tuesday, May 07, 2002
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Many human genes are transcribed from the antisense promoter of L1 retrotransposon.
by Nigumann P, Redik K, Mätlik K, Speek M.
Affliation: Center for Gene Technology, Tallinn Technical University and National Institute of Chemical Physics and Biophysics, Tallinn EE12618, Estonia.
Journal: Genomics. 79(5):628-34
Publication Date: Monday, May 06, 2002
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Search and retrieve. Large-scale data generation is becoming increasingly important in biological research. But how good are the tools to make sense of the data?
by Valencia A.
Affliation: Protein Design Group, National Centre for Biotechnoogy CNB-CSIC, Madrid, Spain. valencia@cnb.uam.es
Journal: EMBO Rep. 3(5):396-400
Publication Date: Monday, May 06, 2002
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"Are we there yet?!" Cardiac channelopathy and our journey toward computational medicine.
by Mazhari R.
Affliation:
Journal: Circ Res. 90(8):842-3
Publication Date: Friday, May 03, 2002
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Specificity and stability in topology of protein networks.
by Maslov S, Sneppen K.
Affliation: Department of Physics, Brookhaven National Laboratory, Upton, NY 11973, USA. maslov@bnl.gov
Journal: Science. 296(5569):910-3
Publication Date: Friday, May 03, 2002
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Large-scale transcriptional activity in chromosomes 21 and 22.
by Kapranov P, Cawley SE, Drenkow J, Bekiranov S, Strausberg RL, Fodor SP, Gingeras TR.
Affliation: Affymetrix, Santa Clara, CA 95051, USA., National Cancer Institute, Bethesda, MD 20892, USA.
Journal: Science. 296(5569):916-9
Publication Date: Friday, May 03, 2002
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Information overload.
by Dennis C.
Affliation:
Journal: Nature. 417(6884):14
Publication Date: Thursday, May 02, 2002
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Manic-depression genes and the new millennium: poised for discovery.
by Baron M.
Affliation: Department of Psychiatry, Columbia University College of Physicians and Surgeons and Department of Medical Genetics, New York State Psychiatric Institute, New York 10032, USA. mb17@columbia.edu
Journal: Mol Psychiatry. 7(4):342-58
Publication Date: Thursday, May 02, 2002
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The global phylogeny of glycolytic enzymes.
by Canback B, Andersson SG, Kurland CG.
Affliation: Department of Molecular Evolution, Evolutionary Biology Centre, University of Uppsala, S-75236, Uppsala, Sweden. bjorn.canback@ebc.uu.se
Journal: Proc Natl Acad Sci U S A. 99(9):6097-102
Publication Date: Wednesday, May 01, 2002
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Is 'big biology' a commercial enterprise?
by Swindells M.
Affliation: Inpharmatica Ltd, 60 Charlotte Street, London W1T 2NU, UK. m.swindells@inpharmatica.co.uk
Journal: Genome Biol. 03 2002;3(4):COMMENT2004
Publication Date: Wednesday, May 01, 2002
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Genome informatics for data-driven biology.
by Nakai K, Vert JP.
Affliation: Human Genome Center, Institute of Medical Science, University of Tokyo, 4-6-1 Shirokanedai, Minatoku, Tokyo 108-8639, Japan. knakai@ims.u-tokyo.ac.jp
Journal: Genome Biol. 03 2002;3(4):REPORTS4010
Publication Date: Wednesday, May 01, 2002
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Chips to hits.
by Appasani K.
Affliation: PerkinElmertrade mark Life Sciences, 549 Albany Street, Boston, MA 02118, USA. krishnarao.appasani@perkinelmer.com
Journal: Genome Biol. 04 2002;3(4):REPORTS4012
Publication Date: Wednesday, May 01, 2002
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Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome.
by Kosarev P, Mayer KF, Hardtke CS.
Affliation: Department of Biology, McGill University, Montréal, Québec H3A 1B1, Canada. christian.hardtke@mcgill.ca
Journal: Genome Biol. 03 2002;3(4):RESEARCH0016
Publication Date: Wednesday, May 01, 2002
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