Applications of generalized pair hidden Markov models to alignment and gene finding problems.
by Pachter L, Alexandersson M, Cawley S.
Affliation: Department of Mathematics, University of California Berkeley, Berkeley, CA 94720, USA. lpachter@math.berkeley.edu
Journal: J Comput Biol. 9(2):389-99
Publication Date: Friday, May 17, 2002
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Learning gene functional classifications from multiple data types.
by Pavlidis P, Weston J, Cai J, Noble WS.
Affliation: Columbia Genome Center, Columbia University, New York, NY 10027, USA.
Journal: J Comput Biol. 9(2):401-11
Publication Date: Friday, May 17, 2002
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Large scale sequencing by hybridization.
by Shamir R, Tsur D.
Affliation: School of Computer Science, Tel-Aviv University, Tel-Aviv, Israel.
Journal: J Comput Biol. 9(2):413-28
Publication Date: Friday, May 17, 2002
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Zinc finger gene clusters and tandem gene duplication.
by Tang M, Waterman M, Yooseph S.
Affliation: ACLARA BioSciences, 1288 Pear Street, Mountain View, CA 94043, USA.
Journal: J Comput Biol. 9(2):429-46
Publication Date: Friday, May 17, 2002
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A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.
by Thijs G, Marchal K, Lescot M, Rombauts S, De Moor B, Rouzé P, Moreau Y.
Affliation: ESAT-SCD, KULeuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium. GertThijs@esat.kuleuven.ac.be
Journal: J Comput Biol. 9(2):447-64
Publication Date: Friday, May 17, 2002
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Bioinformatics, functional genomics, and proteomics study of Bacillus sp.
by Sinchaikul S, Sookkheo B, Topanuruk S, Juan HF, Phutrakul S, Chen ST.
Affliation: Institute of Biological Chemistry, Academia Sinica, 128 Yen Chiu Yuan Rd., Sec II, Nankang, Taipei 11529, Taiwan.
Journal: J Chromatogr B Analyt Technol Biomed Life Sci. 771(1-2):261-87
Publication Date: Friday, May 17, 2002
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From sequence to biology: the impact on bioinformatics.
by Fuchs R.
Affliation:
Journal: Bioinformatics. 18(4):505-6
Publication Date: Friday, May 17, 2002
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Application of Bayesian decomposition for analysing microarray data.
by Moloshok TD, Klevecz RR, Grant JD, Manion FJ, Speier WF, Ochs MF.
Affliation: Bioinformatics Working Group, Fox Chase Cancer Center, Philadelphia, PA 19111, USA. td_moloshok@fccc.edu
Journal: Bioinformatics. 18(4):566-75
Publication Date: Friday, May 17, 2002
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Tech.Sight. Understanding disease cell by cell.
by Rubin MA.
Affliation: Department of Pathology, University of Michigan Medical School, Ann Arbor, MI 48109, USA. marubin@umich.edu
Journal: Science. 296(5571):1329-30
Publication Date: Friday, May 17, 2002
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Using motion planning to study protein folding pathways.
by Amato NM, Song G.
Affliation: Department of Computer Science, Texas A&M University, College Station, TX 77843-3112, USA. amato@cs.tamu.edu
Journal: J Comput Biol. 9(2):149-68
Publication Date: Friday, May 17, 2002
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An introduction to bioinformatics.
by Brzeski H.
Affliation: Windber Research Institute, Windber, PA, USA.
Journal: Methods Mol Biol. 187:193-208
Publication Date: Thursday, May 16, 2002
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Molecular cloning and characterization of ST7R (ST7-like, ST7L) on human chromosome 1p13, a novel gene homologous to tumor suppressor gene ST7 on human chromosome 7q31.
by Katoh M.
Affliation: Genetics and Cell Biology Section, Genetics Division, National Cancer Center Research Institute, Tsukiji 5-chome, Chuo-ku, Tokyo 104-0045, Japan. mkatoh@ncc.go.jp
Journal: Int J Oncol. 20(6):1247-53
Publication Date: Wednesday, May 15, 2002
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Isolation and characterization of homogentisate phytyltransferase genes from Synechocystis sp. PCC 6803 and Arabidopsis.
by Savidge B, Weiss JD, Wong YH, Lassner MW, Mitsky TA, Shewmaker CK, Post-Beittenmiller D, Valentin HE.
Affliation: Monsanto Company, Calgene Campus, 1920 Fifth Street, Davis, California 95616, USA.
Journal: Plant Physiol. 129(1):321-32
Publication Date: Wednesday, May 15, 2002
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Identification of four candidate cGMP targets in Dictyostelium.
by Goldberg JM, Bosgraaf L, Van Haastert PJ, Smith JL.
Affliation: Boston Biomedical Research Institute, 64 Grove Street, Watertown, MA 02472-2829, USA.
Journal: Proc Natl Acad Sci U S A. 99(10):6749-54
Publication Date: Wednesday, May 15, 2002
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Gene expression analysis reveals chemical-specific profiles.
by Morgan KT.
Affliation: Toxicogenomics Mechanisms, GlaxoSmithKline, Inc., Research Triangle Park, NC 27709, USA.
Journal: Toxicol Sci. 67(2):155-6
Publication Date: Wednesday, May 15, 2002
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Gene expression analysis reveals chemical-specific profiles.
by Hamadeh HK, Bushel PR, Jayadev S, Martin K, DiSorbo O, Sieber S, Bennett L, Tennant R, Stoll R, Barrett JC, Blanchard K, Paules RS, Afshari CA.
Affliation: National Institute of Environmental Health Sciences, P.O. Box 12233, MD2-04, Research Triangle Park, NC 27709, USA.
Journal: Toxicol Sci. 67(2):219-31
Publication Date: Wednesday, May 15, 2002
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Prediction of compound signature using high density gene expression profiling.
by Hamadeh HK, Bushel PR, Jayadev S, DiSorbo O, Bennett L, Li L, Tennant R, Stoll R, Barrett JC, Paules RS, Blanchard K, Afshari CA.
Affliation: National Institute of Environmental Health Sciences, P.O. Box 12233, MD2-04, Research Triangle Park, NC 27709, USA.
Journal: Toxicol Sci. 67(2):232-40
Publication Date: Wednesday, May 15, 2002
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GIPC gene family (Review).
by Katoh M.
Affliation: Genetics and Cell Biology Section, Genetics Division, National Cancer Center Research Institute, Tsukiji 5-chome, Chuo-ku, Tokyo 104-0045, Japan. mkatoh@ncc.go.jp
Journal: Int J Mol Med. 9(6):585-9
Publication Date: Wednesday, May 15, 2002
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Bioinformatics and high throughput approach to create genomic resources for the study of bovine immunobiology.
by Coussens PM, Nobis W.
Affliation: Department of Animal Science and Center for Animal Functional Genomics, Michigan State University, East Lansing 48824, USA. coussens@msu.edu
Journal: Vet Immunol Immunopathol. 86(3-4):229-44
Publication Date: Tuesday, May 14, 2002
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Computational genomics of noncoding RNA genes.
by Eddy SR.
Affliation: Howard Hughes Medical Institute, Department of Genetics, Washington University School of Medicine, St. Louis, MO 63110, USA. eddy@genetics.wustl.edu
Journal: Cell. 109(2):137-40
Publication Date: Tuesday, May 14, 2002
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