NUBIScan, an in silico approach for prediction of nuclear receptor response elements.
by Podvinec M, Kaufmann MR, Handschin C, Meyer UA.
Affliation: Division of Pharmacology/Neurobiology, Biozentrum of the University of Basel, CH-4056 Basel, Switzerland. michael.podvinec@unibas.ch
Journal: Mol Endocrinol. 16(6):1269-79
Publication Date: Friday, May 31, 2002
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Genomics. Genome centers push for polished draft.
by Pennisi E.
Affliation:
Journal: Science. 296(5573):1600-1
Publication Date: Friday, May 31, 2002
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Genomics. Mmu 16--comparative genomic highlights.
by Copeland NG, Jenkins NA, O'Brien SJ.
Affliation: Mouse Cancer Genetics Program, National Cancer Institute, Frederick, MD, 21702, USA. copeland@ncifcrf.gov
Journal: Science. 296(5573):1617-8
Publication Date: Friday, May 31, 2002
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A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.
by Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GL, Wides R, Halpern A, Li PW, Sutton GG, Nadeau J, Salzberg SL, Holt RA, Kodira CD, Lu F, Chen L, Deng Z, Evangelista CC, Gan W, Heiman TJ, Li J, Li Z, Merkulov GV, Milshina NV, Naik AK, Qi R, Shue BC, Wang A, Wang J, Wang X, Yan X, Ye J, Yooseph S, Zhao Q, Zheng L, Zhu SC, Biddick K, Bolanos R, Delcher AL, Dew IM, Fasulo D, Flanigan MJ, Huson DH, Kravitz SA, Miller JR, Mobarry CM, Reinert K, Remington KA, Zhang Q, Zheng XH, Nusskern DR, Lai Z, Le
Affliation: Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA. richard.mural@celera.com
Journal: Science. 296(5573):1661-71
Publication Date: Friday, May 31, 2002
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Science's policy on data deposition.
by Bourne PE.
Affliation:
Journal: Science. 296(5573):1609; author reply 1609
Publication Date: Friday, May 31, 2002
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MAD phasing: probabilistic estimate of [F (oa)].
by Burla MC, Carrozzini B, Cascarano GL, Giacovazzo C, Polidori G, Siliqi D.
Affliation: Dipartimento di Scienze della Terra, Piazza Universita', 06100 Perugia, Italy.
Journal: Acta Crystallogr D Biol Crystallogr. 58(Pt 6 Pt 2):928-35
Publication Date: Thursday, May 30, 2002
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The Protein Data Bank.
by Berman HM, Battistuz T, Bhat TN, Bluhm WF, Bourne PE, Burkhardt K, Feng Z, Gilliland GL, Iype L, Jain S, Fagan P, Marvin J, Padilla D, Ravichandran V, Schneider B, Thanki N, Weissig H, Westbrook JD, Zardecki C.
Affliation: RCSB, Department of Chemistry, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ, USA. berman@rcsb.rutgers.edu
Journal: Acta Crystallogr D Biol Crystallogr. 58(Pt 6 No 1):899-907
Publication Date: Thursday, May 30, 2002
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Genomics of phytopathogenic fungi and the development of bioinformatic resources.
by Soanes DM, Skinner W, Keon J, Hargreaves J, Talbot NJ.
Affliation: School of Biological Sciences, University of Exeter, Washington Singer Laboratories, UK.
Journal: Mol Plant Microbe Interact. 15(5):421-7
Publication Date: Thursday, May 30, 2002
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Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum.
by Kruger WM, Pritsch C, Chao S, Muehlbauer GJ.
Affliation: Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul 55108, USA.
Journal: Mol Plant Microbe Interact. 15(5):445-55
Publication Date: Thursday, May 30, 2002
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Characterization and in silico mapping of a novel murine zinc finger transcription factor.
by Wride MA, Mansergh FC, Somani JM, Winkfein RJ, Rancourt DE.
Affliation: Department of Biochemistry and Molecular Biology, University of Calgary, 3330 Hospital Drive N.W., Calgary, AB, Canada T2N 4N1.
Journal: Gene. 289(1-2):49-59
Publication Date: Thursday, May 30, 2002
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Protein crystallization for genomics: towards high-throughput optimization techniques.
by Chayen NE, Saridakis E.
Affliation: Biological Structure and Function Section, Division of Biomedical Sciences, Faculty of Medicine, Imperial College, London SW7 2AZ, England. n.chayen@ic.ac.uk
Journal: Acta Crystallogr D Biol Crystallogr. 58(Pt 6 Pt 2):921-7
Publication Date: Thursday, May 30, 2002
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Conserved codon composition of ribosomal protein coding genes in Escherichia coli, Mycobacterium tuberculosis and Saccharomyces cerevisiae: lessons from supervised machine learning in functional genomics.
by Lin K, Kuang Y, Joseph JS, Kolatkar PR.
Affliation: IMCB-BIC, Institute of Molecular and Cell Biology, 30 Medical Drive, 117609 Singapore.
Journal: Nucleic Acids Res. 30(11):2599-607
Publication Date: Wednesday, May 29, 2002
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Occurrence, conformational features and amino acid propensities for the pi-helix.
by Fodje MN, Al-Karadaghi S.
Affliation: Department of Molecular Biophysics, Center for Chemistry and Chemical Engineering, University of Lund, Box 124, SE-221 00 Lund, Sweden.
Journal: Protein Eng. 15(5):353-8
Publication Date: Wednesday, May 29, 2002
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Modelling the structure of the fusion protein from human respiratory syncytial virus.
by Smith BJ, Lawrence MC, Colman PM.
Affliation: Biomolecular Research Institute, 343 Royal Parade, Parkville, Victoria 3052, Australia.
Journal: Protein Eng. 15(5):365-71
Publication Date: Wednesday, May 29, 2002
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Structural restoration of inactive recombinant fish growth hormones by chemical chaperonin and solvent restraint approaches.
by Chang CC, Tsai CT, Chang CY.
Affliation: Institute of Zoology, Academia Sinica, Nankang, Taipei 11529, Taiwan.
Journal: Protein Eng. 15(5):437-41
Publication Date: Wednesday, May 29, 2002
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Molecular cloning and initial characterization of the MG61/PORC gene, the human homologue of the Drosophila segment polarity gene Porcupine.
by Caricasole A, Ferraro T, Rimland JM, Terstappen GC.
Affliation: GlaxoSmithKline, Medicines Research Centre, Via Fleming 4, 37135 Verona, Italy.
Journal: Gene. 288(1-2):147-57
Publication Date: Wednesday, May 29, 2002
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Heterogeneous gene distribution reflects human genome complexity as detected at the cytogenetic level.
by Musio A, Mariani T, Vezzoni P, Frattini A.
Affliation: Istituto di Tecnologie Biomediche, C.N.R., Via Fratelli Cervi, 93, 20090, MI, Segrate, Italy. musio@itba.mi.cnr.it
Journal: Cancer Genet Cytogenet. 134(2):168-71
Publication Date: Wednesday, May 29, 2002
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Synteny between Arabidopsis thaliana and rice at the genome level: a tool to identify conservation in the ongoing rice genome sequencing project.
by Salse J, Piégu B, Cooke R, Delseny M.
Affliation: Laboratoire Génome et Développement des Plantes, Université de Perpignan (Centre National de la Recherche Scientifique, UMR 5096), 52 Avenue de Villeneuve, F-66860 Perpignan Cedex, France.
Journal: Nucleic Acids Res. 30(11):2316-28
Publication Date: Wednesday, May 29, 2002
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A novel type of conserved DNA-binding domain in the transcriptional regulators of the AlgR/AgrA/LytR family.
by Nikolskaya AN, Galperin MY.
Affliation: National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Journal: Nucleic Acids Res. 30(11):2453-9
Publication Date: Wednesday, May 29, 2002
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Fast algorithms for large-scale genome alignment and comparison.
by Delcher AL, Phillippy A, Carlton J, Salzberg SL.
Affliation: Department of Computer Science, Loyola College in Maryland, Baltimore, MD 21210, USA.
Journal: Nucleic Acids Res. 30(11):2478-83
Publication Date: Wednesday, May 29, 2002
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