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Bioinformatics Journals and Computational Biology Journals


Bioinformatics Journals and Computational Biology Journals - December, 2001

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FLEXGene repository: from sequenced genomes to gene repositories for high-throughput functional biology and proteomics.
by Brizuela L, Braun P, LaBaer J.
Affliation: Department of Biological Chemistry and Molecular Pharmacology, Institute of Proteomics, Harvard Medical School, 250 Longwood Ave., Boston, MA 02115, USA.
Journal: Mol Biochem Parasitol. 118(2):155-65
Publication Date: Wednesday, December 12, 2001
PubMed citation

Phat--a gene finding program for Plasmodium falciparum.
by Cawley SE, Wirth AI, Speed TP.
Affliation: Department of Statistics, U.C. Berkeley, Berkeley, CA 94720, USA. simon_cawley@affymetrix.com
Journal: Mol Biochem Parasitol. 118(2):167-74
Publication Date: Wednesday, December 12, 2001
PubMed citation

Discovering patterns in Plasmodium falciparum genomic DNA.
by Stern L, Allison L, Coppel RL, Dix TI.
Affliation: Department of Computer Science and Software Engineering, The University of Melbourne, Melbourne, Victoria 3010, Australia. stern@unimelb.edu.au
Journal: Mol Biochem Parasitol. 118(2):175-86
Publication Date: Wednesday, December 12, 2001
PubMed citation

Prediction of many new exons and introns in Plasmodium falciparum chromosome 2.
by Huestis R, Fischer K.
Affliation: Microbiology Department and the Victorian Bioinformatics Consortium, Monash University, Clayton, Vic. 3800, Australia. robert.huestis@med.monash.edu.au
Journal: Mol Biochem Parasitol. 118(2):187-99
Publication Date: Wednesday, December 12, 2001
PubMed citation

Profiling the malaria genome: a gene survey of three species of malaria parasite with comparison to other apicomplexan species.
by Carlton JM, Muller R, Yowell CA, Fluegge MR, Sturrock KA, Pritt JR, Vargas-Serrato E, Galinski MR, Barnwell JW, Mulder N, Kanapin A, Cawley SE, Hide WA, Dame JB.
Affliation: Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20892, USA. carlton@tigr.org
Journal: Mol Biochem Parasitol. 118(2):201-10
Publication Date: Wednesday, December 12, 2001
PubMed citation

The sequence of a 200 kb portion of a Plasmodium vivax chromosome reveals a high degree of conservation with Plasmodium falciparum chromosome 3.
by Tchavtchitch M, Fischer K, Huestis R, Saul A.
Affliation: Australian Centre for International Tropical Health and Nutrition, Malaria Biology Laboratory, The Queensland Institute of Medical Research, PO Royal Brisbane Hospital, Q 4029 Brisbane, Australia. marinat@qimr.edu.au
Journal: Mol Biochem Parasitol. 118(2):211-22
Publication Date: Wednesday, December 12, 2001
PubMed citation

Clags in Plasmodium falciparum and other species of Plasmodium.
by Holt DC, Fischer K, Tchavtchitch M, Wilson DW, Hauquitz NE, Hawthorne PL, Gardiner DL, Trenholme KR, Kemp DJ.
Affliation: The Queensland Institute of Medical Research, The Australian Centre for International and Tropical Health and Nutrition, The University of Queensland, Brisbane 4029, Australia. deborahH@qimr.edu.au
Journal: Mol Biochem Parasitol. 118(2):259-63
Publication Date: Wednesday, December 12, 2001
PubMed citation



A family of 12 human genes containing oxysterol-binding domains.
by Jaworski CJ, Moreira E, Li A, Lee R, Rodriguez IR.
Affliation: National Eye Institute, National Institutes of Health, Bethesda, Maryland 20892, USA. jaworski@helix.nih.gov
Journal: Genomics. 78(3):185-96
Publication Date: Wednesday, December 12, 2001
PubMed citation

Future perspectives.
by Hastie N.
Affliation: MRC Human Genetics Unit, Western General Hospital, Crewe Road, Edinburgh EH4 2XU, U.K. n.hastie@hgu.mrc.ac.uk
Journal: Essays Biochem. 37:121-7
Publication Date: Friday, December 07, 2001
PubMed citation

Towards a reliable objective function for multiple sequence alignments.
by Thompson JD, Plewniak F, Ripp R, Thierry JC, Poch O.
Affliation: Laboratoire de Biologie et G?énomique Structurales, Institut de Génétique et de Biologie Moléculaire et Cellulaire, (CNRS/INSERM/ULP), Illkirch Cedex, 67404, France.
Journal: J Mol Biol. 314(4):937-51
Publication Date: Wednesday, December 05, 2001
PubMed citation

Evolutionary engineering of industrially important microbial phenotypes.
by Sauer U.
Affliation: Institute of Biotechnology, ETH Z?ürich, 8093 Zürich, Switzerland. sauer@biotech.biol.ethz.ch
Journal: Adv Biochem Eng Biotechnol. 73:129-69
Publication Date: Wednesday, December 05, 2001
PubMed citation

Kinetic modelling approaches to in vivo imaging.
by Phair RD, Misteli T.
Affliation: BioInformatics Services, Rockville, Maryland 20854, USA. rphair@bioinformaticsservices.com
Journal: Nat Rev Mol Cell Biol. 2(12):898-907
Publication Date: Tuesday, December 04, 2001
PubMed citation

Gene expression profiling of human GV oocytes: an analysis of a profile obtained by Serial Analysis of Gene Expression (SAGE).
by Stanton JL, Bascand M, Fisher L, Quinn M, Macgregor A, Green DP.
Affliation: Department of Anatomy and Structural Biology, University of Otago Medical School, PO Box 913, Dunedin, New Zealand.
Journal: J Reprod Immunol. 53(1-2):193-201
Publication Date: Monday, December 03, 2001
PubMed citation

Comparative genomics between rice and Arabidopsis shows scant collinearity in gene order.
by Liu H, Sachidanandam R, Stein L.
Affliation: Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.
Journal: Genome Res. 11(12):2020-6
Publication Date: Monday, December 03, 2001
PubMed citation

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